| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BAS3838 |
|---|
| Symbol | |
|---|
| ID | 2848073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus anthracis str. Sterne |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005945 |
|---|
| Strand | - |
|---|
| Start bp | 3791572 |
|---|
| End bp | 3792594 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637507075 |
|---|
| Product | PDZ domain-containing protein |
|---|
| Protein accession | YP_030088 |
|---|
| Protein GI | 49186836 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.122168 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAGC GTTTTCGGTT TATATATGCA ATTTTAATAG GGGTTATATT GGCAATGTTA
CTTGTTTACG TACGCCTGCC GTATTATATA ACGAAACCAG GAATGGCTGC CAAATTAGAG
CCTTACGTTC AAGTGGAGGG GGGGACAAAA GAGTCTGGTG ATTTTATGCT TGTTACGGTT
TCGATGGGAC CAGCAAATGT AGTGAATTTA ATAGCGGCAC AGTTTAATAA ATATACACAT
ATTTCAAAAG CGGAAGAAAT ATTGCAAAAA GGTGAAAGTG ATGAAGAATA TCAATTTCGC
CAAAATTATG CGATGAAAGA TTCGCAAAAT GCAGCGATCT ATAATGCTTA TAAACGTGCA
AATCGTACTG TTTCTTTTGA AAATAAAGGT GTGTTGGTTG CTGGTGTAGC GAAAGGGATG
CCGTCAGAAG GAAAGCTTAA ACTTGGAGAT GTCATCATTG CTGTCGACGG AAAAACATTT
GAAAAGACGG AACAATTTAT TGAATATATG ACAGGGGAAA AAGAAGGGGA TACAGTAAAT
ATTGAGTACA AGAGGGATGG GAAACAGTTA AAAGAAAATT TAAATGTAAA GACTATTCCG
AATGGAAATG GACGCGTTGG TATAGGTGTT TCTATCGTTA CGGAAAGAGA ATTAGTGGTA
GATCCAAAAG TGAAAATTGA CTCTCATGAA ATAGGTGGAC CATCGGCAGG TCTCATGTTT
ACATTAGAAA TATATAATCA ACTGGTGGAC GAGGATTTAA CAAGAGGACA TGAAATAGCT
GGAACAGGTA CGATTAATGA AAAGGGAGAA ATTGGCCCGA TTGGCGGTAT TCAGCAAAAA
GTGGTCGCTG CAAGTGATGC TGGTGCTGAA GTGTTCTTTG CGCCAAATGA AAAAGGTGCG
GAGAAATCGA ATTATAAAGA TGCACTTGAG GCTGCGAAAG ATATTAAAAC GAAAATGAAA
GTTGTGCCAG TTGATACGTT GGATGATGCA TTAATGTATC TGGAAAAAAT GGGGAATAAA
TAA
|
|---|
| Protein sequence | MFKRFRFIYA ILIGVILAML LVYVRLPYYI TKPGMAAKLE PYVQVEGGTK ESGDFMLVTV
SMGPANVVNL IAAQFNKYTH ISKAEEILQK GESDEEYQFR QNYAMKDSQN AAIYNAYKRA
NRTVSFENKG VLVAGVAKGM PSEGKLKLGD VIIAVDGKTF EKTEQFIEYM TGEKEGDTVN
IEYKRDGKQL KENLNVKTIP NGNGRVGIGV SIVTERELVV DPKVKIDSHE IGGPSAGLMF
TLEIYNQLVD EDLTRGHEIA GTGTINEKGE IGPIGGIQQK VVAASDAGAE VFFAPNEKGA
EKSNYKDALE AAKDIKTKMK VVPVDTLDDA LMYLEKMGNK
|
|---|
| |