Gene BAS3082 details

Gene Information

• Locus tag: BAS3082
• ID: 2849310
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus anthracis str. Sterne
• Kingdom: Bacteria
• Replicon accession: NC_005945
• Strand: -
• Start bp: 3062596
• End bp: 3063096
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637506326
• Product: RNA polymerase sigma factor SigM
• Protein accession: YP_029339
• Protein GI: 49186087
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family; [TIGR02950] RNA polymerase sigma factor, SigM family

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.258935
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTG AAGAAATATA TAAGATTTAT ATAAACGATG TGTACCGGTA TTTATTTTCC 
CTTTCTCGTA GCCATCATGC AGCGGAGGAC TTGATGCAGG AGACTTTTTA TCGTGCGTAT 
CTTTATCTAG AAGACTATGA AAACCAAAAG GTAAAATCAT GGCTCTTTAA AGTGGCATAT 
CATACGTTTA TTGATTTTGT TAGAAAAGAG AAAAAAGTAT CTTTTGTAGG AACGGAGGAA 
TTAGAGGCAA TTCAAGCAGG TGAATCTACA GAAGAGTATG TAGTCGCAAA AAATAGTTAT 
GAAAAATTAA TTCGGATTAT TCATACTTTA CCTGTGATAG AGGCACAAGC TGTTTTATTA 
TGTGATGTAC ATCAATTAAC GTACGAAGAG GGTGCTTCTG TATTAGATTT AAAGTTAAAC 
ACGTATAAAA GCCACATATT TCGTGGGAGA AAAAGATTAA AACAATTGTT AAAGGAGGAA 
AAGAGTCAAA ATGACAAATG A 

 

Protein sequence

MEIEEIYKIY INDVYRYLFS LSRSHHAAED LMQETFYRAY LYLEDYENQK VKSWLFKVAY 
HTFIDFVRKE KKVSFVGTEE LEAIQAGEST EEYVVAKNSY EKLIRIIHTL PVIEAQAVLL 
CDVHQLTYEE GASVLDLKLN TYKSHIFRGR KRLKQLLKEE KSQNDK