Gene BAS1071 details

Gene Information

• Locus tag: BAS1071
• Symbol: rocD
• ID: 2852800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus anthracis str. Sterne
• Kingdom: Bacteria
• Replicon accession: NC_005945
• Strand: -
• Start bp: 1123438
• End bp: 1124628
• Gene Length: 1191 bp
• Protein Length: 396 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637504329
• Product: ornithine--oxo-acid transaminase
• Protein accession: YP_027343
• Protein GI: 49184091
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4992] Ornithine/acetylornithine aminotransferase
• TIGRFAM ID: [TIGR01885] ornithine aminotransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.953264
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCAAA CTAAGGATAT CATCGAACTT ACAGACACAT ACGGGGCAAA TAACTATCAC 
CCACTTCCAA TCGTTATTTC TAAAGCAGAA GGCGTTTGGG TAGAAGATCC TGAAGGAAAC 
CGCTATATGG ACTTATTAAG TGCATATTCG GCAGTAAACC AAGGTCATCG TCACCCAAAA 
ATTATTAACG CTTTAATTGA CCAAGCTAAT CGTGTTACGT TAACTTCTCG TGCTTTCCAT 
AGCGATCAAT TAGGTCCTTG GTACGAAAAA GTTGCGAAAC TAACTAATAA AGAAATGGTA 
CTTCCAATGA ATACAGGTGC AGAAGCTGTT GAAACTGCAA TTAAAACAGC TCGCCGCTGG 
GCTTATGATG TGAAGAAAGT AGAAGCAAAT CGTGCTGAGA TTATCGTTTG TGAAGATAAC 
TTCCACGGAC GTACGATGGG TGCTGTTTCT ATGTCTTCAA ACGAAGAGTA CAAGCGTGGA 
TTCGGTCCAA TGCTTCCTGG CATTATCGTA ATTCCTTACG GTGATTTAGA AGCGTTAAAA 
GCTGCTATTA CACCAAACAC AGCTGCATTC ATTTTAGAGC CAATCCAAGG TGAAGCAGGA 
ATTAACATCC CACCAGCTGG TTTCTTAAAA GAAGCTCTTG AAGTATGTAA AAAAGAAAAC 
GTTTTATTCG TAGCAGATGA AATCCAAACT GGCTTAGGCC GTACTGGTAA AGTATTTGCT 
TGTGATTGGG ACAATGTAAC TCCTGACATG TACATACTTG GTAAAGCACT TGGCGGCGGC 
GTATTCCCAA TCTCTTGCGC AGCAGCAAAC CGCGACATTT TAGGCGTATT CGAGCCAGGT 
TCTCACGGTT CTACATTCGG TGGTAACCCA CTTGCATGTG CTGTTTCTAT CGCAGCTCTT 
GAAGTGTTAG AAGAAGAAAA ATTAACAGAG CGTTCTCTTC AATTAGGTGA AAAATTAGTT 
GGGCAATTAA AAGAGATTGA TAACCCAATG ATCACTGAAG TTCGCGGTAA AGGTTTATTC 
ATCGGTATCG AATTAAACGA GCCAGCTCGT CCTTACTGTG AACAACTAAA AGCAGCTGGT 
CTATTATGTA AAGAAACACA CGAAAATGTA ATTCGTATCG CACCACCACT AGTAATCTCT 
GAAGAAGATT TAGAGTGGGC GTTCCAAAAA ATTAAAGCGG TATTATCGTA A 

 

Protein sequence

MIQTKDIIEL TDTYGANNYH PLPIVISKAE GVWVEDPEGN RYMDLLSAYS AVNQGHRHPK 
IINALIDQAN RVTLTSRAFH SDQLGPWYEK VAKLTNKEMV LPMNTGAEAV ETAIKTARRW 
AYDVKKVEAN RAEIIVCEDN FHGRTMGAVS MSSNEEYKRG FGPMLPGIIV IPYGDLEALK 
AAITPNTAAF ILEPIQGEAG INIPPAGFLK EALEVCKKEN VLFVADEIQT GLGRTGKVFA 
CDWDNVTPDM YILGKALGGG VFPISCAAAN RDILGVFEPG SHGSTFGGNP LACAVSIAAL 
EVLEEEKLTE RSLQLGEKLV GQLKEIDNPM ITEVRGKGLF IGIELNEPAR PYCEQLKAAG 
LLCKETHENV IRIAPPLVIS EEDLEWAFQK IKAVLS