Gene PSPTO_A0072 details

Gene Information

• Locus tag: PSPTO_A0072
• ID: 4074384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004633
• Strand: +
• Start bp: 3564
• End bp: 5705
• Gene Length: 2142 bp
• Protein Length: 713 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637408340
• Product: phage integrase family site specific recombinase
• Protein accession: YP_611158
• Protein GI: 98985776

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTACG TGCCATTTGA TGTGGATCAT TATGAGCGTC AAGAGAAACT GTCGGATCTG 
GAGCGGACTA TACTCTCGAA TCGTCGGTAT CGTTCCGACT GGGCCTATCT ACAATCGAGT 
GTACCCAGAC TCGTTATTCC TCTAATTGAT CTCGTGGCAC ACGCTGGCGT TTCAGATCGA 
TTGGCGGTCT CCTCTGTGTC CGTCATTCTC TGGCACGTTA GTAGGACTGA TATCCCCTAT 
TGGTCTTGGT CAGAAATGCA GTGGTTGGCT CTCCTCGATA CCCAAGCTGG GTCGCGCCCT 
TATCTGGCAG CGGTCGCATA CCACATGGGA GGTTTTCGCA CGCCACAGCG CATTACCAAA 
TTTCGCCAAT CTGCGATTTA TGCATCATTC ATTTTCGGGC ACAAGATATT CAAGGATGAG 
CTCACTCGTT TAAGTACGGT TTTGAAATCA CTGGGCTACA CAGCGCGTCA CCTTGAAAAG 
TTCCTGAGTA GCGTGCTGGG GGCATTGATT TTGGAAAACG GCGACCCTCG GCTTGAGACT 
TTCACGGAAG GGCTTTTGAT TAAAGGCCAA GGCCATCGAA GCGTGGGCAT TGCCAGGCTG 
GTTGGCAAAG TCTCCCACGG TCTAGCTGCA CTAGGTATTC TGGATAAACC GTTACGCAAG 
CGTGGCTATG CTGACTGGCG TGAAAAGAGT ATCGAAGGTA TTGACCCTGT CTGGGTCAGT 
TGGTGTCGTC GCTGGCGAGA CACCTCAACC TTACGTCCCC GTACACGGGA AAGTAACTAC 
AGCTTCATGT TGAGAACCGG CATCTGGTTG ACGCGCGAGC AGCCGTGGGT GAGCTCCCCC 
GTCGATTGGA ACACATCAAC CTGCGCGGCC GTCATCGCGG CGATTGACCG GATGACCGTT 
GGTGAGTGGG CTTTGGAGTC AGCGCTCGGT ACGAAGTTGA AAGGACTTGG TCAAGCGATT 
GCACCGAACT CAAAGCGAGC GTTTCTGCAT GCCTTACGCC GTTTTTTCAT CGACTTTGAA 
CTGTGGGGCT GGGGACGTCT AAAGTTCAGC CCCCGTCATT ACCTGGCCAC ACCCCGTACT 
GTGGCGTTCA ACTCGGGTAT CAATCCACGC GTTATCGACG ACTCCAGTTG GCTCAAGCTG 
GTCTGGGCGA GCCTAAACCT GGAGCGTAAG GATTTGCTCT CGGAAATTCA CTACCCCTTG 
GCGATGGTTC AGGCGGCGGC TGTGGTGTGG ACACACACCG GGCTACGCAG TAATGAAATT 
ATGCGGCTGT CCATGGGGTG TGCGCATGCC CAGCTTCATG AGGTGGTACA CGAAGACGGA 
ACCACAATTC CACCAGAGAC CTTGTGCTAC CTCGATATTC CAGCCAGCAA GACATTCAAG 
GCTTTTGTCA AACCCGTGGC GGTGGTGGTT AAAGAGCGAA TCGACGCCTG GCTTAAAGAA 
AGACCGGTGA ACCAGGCACC ACTTCTGGAT GAACGAACCG GGGAGAAGGT CAGTTACCTG 
TTTCAGTTTC GGGGCAAGCG CATGGGCGTG GGAGTCATCA ACCGTACGAT TATCCCGATG 
CTATGTGCAA AGGCCGGTGT CCCGCTAGAC GACAGTCGCG GTCGTATTAC CAGCCATCGG 
GGGCGCGCCT CGGTCGTTAC TGCATTGGCG AGTGTTCCGC AGGGCATGTC GCTAATGGAG 
CTGATGCAGT GGTCTGGGCA CAGTTCCCCC AGTTCTACGC TCCATTACAT CCGCATCCGC 
CCCACCAAGC TGGCTGCATC ATTTGTCAAA GCTGATCAAA TGTCTCACAT GGTGTCAGTG 
CTTATCGACC ACGACGTAAT CGCACGACGT TCATCTGACC CTTATACCTT TTATGATCTG 
GGCGATTCGT ACTGTTCAAA TCCGTTCTGG AGCAGTTGCC CTCATCGAAT GGCGTGTGCT 
GGCTGCGATT TTAATATTCC CAAAGCCAGT GCCAGAGCGC AGGCTCTGGA AAGTAAAGCG 
TCCATCGGAC ATTATCTGGA GGCCGTGCCC CTGACGGCCG ATGAGCGGGC TATTGTTGAA 
GGTGACCTGG AAAAATTGGA TGGGCTTATA CGCAAGCTCG ATGATGTGCC GACGCTGGAT 
GGCAGAACGC CCAGTCAAAT CGAGGCTAAA AAACACCGAT AA 

 

Protein sequence

MSYVPFDVDH YERQEKLSDL ERTILSNRRY RSDWAYLQSS VPRLVIPLID LVAHAGVSDR 
LAVSSVSVIL WHVSRTDIPY WSWSEMQWLA LLDTQAGSRP YLAAVAYHMG GFRTPQRITK 
FRQSAIYASF IFGHKIFKDE LTRLSTVLKS LGYTARHLEK FLSSVLGALI LENGDPRLET 
FTEGLLIKGQ GHRSVGIARL VGKVSHGLAA LGILDKPLRK RGYADWREKS IEGIDPVWVS 
WCRRWRDTST LRPRTRESNY SFMLRTGIWL TREQPWVSSP VDWNTSTCAA VIAAIDRMTV 
GEWALESALG TKLKGLGQAI APNSKRAFLH ALRRFFIDFE LWGWGRLKFS PRHYLATPRT 
VAFNSGINPR VIDDSSWLKL VWASLNLERK DLLSEIHYPL AMVQAAAVVW THTGLRSNEI 
MRLSMGCAHA QLHEVVHEDG TTIPPETLCY LDIPASKTFK AFVKPVAVVV KERIDAWLKE 
RPVNQAPLLD ERTGEKVSYL FQFRGKRMGV GVINRTIIPM LCAKAGVPLD DSRGRITSHR 
GRASVVTALA SVPQGMSLME LMQWSGHSSP SSTLHYIRIR PTKLAASFVK ADQMSHMVSV 
LIDHDVIARR SSDPYTFYDL GDSYCSNPFW SSCPHRMACA GCDFNIPKAS ARAQALESKA 
SIGHYLEAVP LTADERAIVE GDLEKLDGLI RKLDDVPTLD GRTPSQIEAK KHR