Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0064 |
Symbol | traY-2 |
ID | 1187354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | + |
Start bp | 63781 |
End bp | 65925 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637408397 |
Product | traY protein |
Protein accession | NP_808722 |
Protein GI | 29171538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTCA TTAAACGCTT CTGGTGGATG GGTCTTCTGC TGGTCTTCTC CGTGCCGGTA CTGGCCGATA ACGTGGATTA CCAGACGATC GCGGCAGCCT CCCAAAAGCC CAATGACCTC TCGCGCCAGG CGATGGTCAT GATCATGGGC CAAGTAGCAG TCGATCCATT TGCACCATCA CAGCCAACCT TGATTGGCTC ACTGTTCGCC ATTATCAATG GCGTTCTGGC CGTGATGGCC CTGTTCTGGT TTCTGACCAT CACCCTGAAA ACCATTGTGA AGGCTGGGCA TCAGGGACAG TTTTTCGCAG GCGGTCGATC TGCGTTGTAC CCGATCATGA CGTTTGCCGG TTTCATCATG ATCTTGCCCA CCCAATCAGG TTGGTCACTG GCCCAGCTCG TCATGGTATG GGCCTGCTCC ACCATGGGGG TTGGCAGTGC CAATCTGCTG ACTGATAAAG CTGTGGACAT GATGGACAGC GGCTACTCGA TGGTGACGCA ACCCACGGCT CCTTCAACCC GAAGCGCGGC ACGGGGCATC TTTGAAATGA ACTTGTGCAA GTACGCGATC AACCGTGAGC TGGAGTCGCT GTATGCGGAT GGTGTGGCCA ATACCCCGTT GATTACCACC AAGGGGGGCA ACGGCCAATA CGACACTGGC AACGGCAGCG CGGTGTGTGG TTCTGCCAAA ACACCCAATA CGGGCCGCAC CGGAACCTGG AACCTGCTGT TTGACAGTGA CGTGGACACG AGTGGGGTGA TCACGGCGCA GCACCAAGCG CTAGACACCA TGCAAAGCAC CCTGGATCAA GCGGCACAGG CGTTCGTAGA CACCTACCTG AGCAAGCGCG ACCAGGATAC GGGGAGCTTC CAGGACGCCG AGACGCAGAT CCAGAACGCA GCCGCCGCCT ATGAAAACAC GGTGAACCTG GCCCTCAACA AGATAGATTT CAAGGACACA CTGCAAAGCC AGTTGTCGAG CCAGATCAAA AGCAGTGGTT GGGTGGCCCT GGGCAGTTGG TATCACACCT TCGCCACAGC TAATAACAAG ACCAACGACG TGGCCAGCTC GACCCCGGTT GTCACGGGGA TGAGTAATCT GGGCGAGCAC GGCACCGGCG ACTTGTATAA CCAGGTGTTC GCAGCCTACA AATCGCAGGT GCAGAACAGT ACCTACACCG CGCCGCTGGG GACGCAGACG ACCAAGGATG ACGGGGCGGC AGCGACGGCG AATGACCCGA ATGCAGTGTT TGTTGGCATT TTTAAGTCGC CTATGCAGAA GTTAACCTCG TTATTTGCAA CTGGGAAAAT TGGTACTGAT GCCAGCTTTT CCAACCAGGT GAACCCGCTT ATCAAAATGC AAACCATTGG TGACTACACG CTGGGAACTG TTGAAACCCT GATGGTGGCC TATGCCGGGA CGTGGGCAGC TGCCTCATCG GCCAGTAATT CGCCGTTGGG CTGGGGTGCC AAGATATTTT CGGTGGATGT CGGGGCGGTG GTGAAAGATG TGCTGGGTGC GCTGGCCCCG ATGTTCTATT TCGTCATGTT CGCCCTGCTG GCCATCGGTT TTTCGCTGGC CGTATTTCTG CCTGCTGTGC CCTTTCTGTT CTGGATGGTG GGCATATTCA ACTGGGTCGT CAGTGTGCTG GTGGGCTGTG CGGCGGGCTC AATGTGGGCT GCCACGCACC TGGGGGCCGA AGAGGACAAG GGGAGTCGCA GTACCTACGG TTATATCTTT CTGATCGACA TGATGCTGCG GCCTTCGTTG ATGGTACTGG GGTTCTTTTT TGCGTCGGTG GCCGTAATCG GTGGGGGAAC GATCCTGAAT CTGTTATTCG CCTCGGCGCT GGCCAATGCC AACGCGGACT CGATCGTGGG ATTGTTCAAG ATGATCGGAT GGCTGATGAT CTATGCCCGC ATTGCGACCT TTGGTGTGAC TCGACTCTTT GGCCTGCAGG CGTCCTTGGC GGACTACGTG ATCTCGTTCC TGGGCGGTCG AGAAGGCGCC AACCTGATGG GCGGCATGGT CGATAACATG AAAGGCATGT TTGGTGCTGC TGGCTCTGGG GCACAACGTA CCCCTGGCGT TAAAATGCAA CCTAGGAAGC CTGGCGCAGG GGGCAATGGG GATGGAATCC AGTAG
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Protein sequence | MNLIKRFWWM GLLLVFSVPV LADNVDYQTI AAASQKPNDL SRQAMVMIMG QVAVDPFAPS QPTLIGSLFA IINGVLAVMA LFWFLTITLK TIVKAGHQGQ FFAGGRSALY PIMTFAGFIM ILPTQSGWSL AQLVMVWACS TMGVGSANLL TDKAVDMMDS GYSMVTQPTA PSTRSAARGI FEMNLCKYAI NRELESLYAD GVANTPLITT KGGNGQYDTG NGSAVCGSAK TPNTGRTGTW NLLFDSDVDT SGVITAQHQA LDTMQSTLDQ AAQAFVDTYL SKRDQDTGSF QDAETQIQNA AAAYENTVNL ALNKIDFKDT LQSQLSSQIK SSGWVALGSW YHTFATANNK TNDVASSTPV VTGMSNLGEH GTGDLYNQVF AAYKSQVQNS TYTAPLGTQT TKDDGAAATA NDPNAVFVGI FKSPMQKLTS LFATGKIGTD ASFSNQVNPL IKMQTIGDYT LGTVETLMVA YAGTWAAASS ASNSPLGWGA KIFSVDVGAV VKDVLGALAP MFYFVMFALL AIGFSLAVFL PAVPFLFWMV GIFNWVVSVL VGCAAGSMWA ATHLGAEEDK GSRSTYGYIF LIDMMLRPSL MVLGFFFASV AVIGGGTILN LLFASALANA NADSIVGLFK MIGWLMIYAR IATFGVTRLF GLQASLADYV ISFLGGREGA NLMGGMVDNM KGMFGAAGSG AQRTPGVKMQ PRKPGAGGNG DGIQ
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