Gene PSPTOA0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0064 
SymboltraY-2 
ID1187354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand
Start bp63781 
End bp65925 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content57% 
IMG OID637408397 
ProducttraY protein 
Protein accessionNP_808722 
Protein GI29171538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCA TTAAACGCTT CTGGTGGATG GGTCTTCTGC TGGTCTTCTC CGTGCCGGTA 
CTGGCCGATA ACGTGGATTA CCAGACGATC GCGGCAGCCT CCCAAAAGCC CAATGACCTC
TCGCGCCAGG CGATGGTCAT GATCATGGGC CAAGTAGCAG TCGATCCATT TGCACCATCA
CAGCCAACCT TGATTGGCTC ACTGTTCGCC ATTATCAATG GCGTTCTGGC CGTGATGGCC
CTGTTCTGGT TTCTGACCAT CACCCTGAAA ACCATTGTGA AGGCTGGGCA TCAGGGACAG
TTTTTCGCAG GCGGTCGATC TGCGTTGTAC CCGATCATGA CGTTTGCCGG TTTCATCATG
ATCTTGCCCA CCCAATCAGG TTGGTCACTG GCCCAGCTCG TCATGGTATG GGCCTGCTCC
ACCATGGGGG TTGGCAGTGC CAATCTGCTG ACTGATAAAG CTGTGGACAT GATGGACAGC
GGCTACTCGA TGGTGACGCA ACCCACGGCT CCTTCAACCC GAAGCGCGGC ACGGGGCATC
TTTGAAATGA ACTTGTGCAA GTACGCGATC AACCGTGAGC TGGAGTCGCT GTATGCGGAT
GGTGTGGCCA ATACCCCGTT GATTACCACC AAGGGGGGCA ACGGCCAATA CGACACTGGC
AACGGCAGCG CGGTGTGTGG TTCTGCCAAA ACACCCAATA CGGGCCGCAC CGGAACCTGG
AACCTGCTGT TTGACAGTGA CGTGGACACG AGTGGGGTGA TCACGGCGCA GCACCAAGCG
CTAGACACCA TGCAAAGCAC CCTGGATCAA GCGGCACAGG CGTTCGTAGA CACCTACCTG
AGCAAGCGCG ACCAGGATAC GGGGAGCTTC CAGGACGCCG AGACGCAGAT CCAGAACGCA
GCCGCCGCCT ATGAAAACAC GGTGAACCTG GCCCTCAACA AGATAGATTT CAAGGACACA
CTGCAAAGCC AGTTGTCGAG CCAGATCAAA AGCAGTGGTT GGGTGGCCCT GGGCAGTTGG
TATCACACCT TCGCCACAGC TAATAACAAG ACCAACGACG TGGCCAGCTC GACCCCGGTT
GTCACGGGGA TGAGTAATCT GGGCGAGCAC GGCACCGGCG ACTTGTATAA CCAGGTGTTC
GCAGCCTACA AATCGCAGGT GCAGAACAGT ACCTACACCG CGCCGCTGGG GACGCAGACG
ACCAAGGATG ACGGGGCGGC AGCGACGGCG AATGACCCGA ATGCAGTGTT TGTTGGCATT
TTTAAGTCGC CTATGCAGAA GTTAACCTCG TTATTTGCAA CTGGGAAAAT TGGTACTGAT
GCCAGCTTTT CCAACCAGGT GAACCCGCTT ATCAAAATGC AAACCATTGG TGACTACACG
CTGGGAACTG TTGAAACCCT GATGGTGGCC TATGCCGGGA CGTGGGCAGC TGCCTCATCG
GCCAGTAATT CGCCGTTGGG CTGGGGTGCC AAGATATTTT CGGTGGATGT CGGGGCGGTG
GTGAAAGATG TGCTGGGTGC GCTGGCCCCG ATGTTCTATT TCGTCATGTT CGCCCTGCTG
GCCATCGGTT TTTCGCTGGC CGTATTTCTG CCTGCTGTGC CCTTTCTGTT CTGGATGGTG
GGCATATTCA ACTGGGTCGT CAGTGTGCTG GTGGGCTGTG CGGCGGGCTC AATGTGGGCT
GCCACGCACC TGGGGGCCGA AGAGGACAAG GGGAGTCGCA GTACCTACGG TTATATCTTT
CTGATCGACA TGATGCTGCG GCCTTCGTTG ATGGTACTGG GGTTCTTTTT TGCGTCGGTG
GCCGTAATCG GTGGGGGAAC GATCCTGAAT CTGTTATTCG CCTCGGCGCT GGCCAATGCC
AACGCGGACT CGATCGTGGG ATTGTTCAAG ATGATCGGAT GGCTGATGAT CTATGCCCGC
ATTGCGACCT TTGGTGTGAC TCGACTCTTT GGCCTGCAGG CGTCCTTGGC GGACTACGTG
ATCTCGTTCC TGGGCGGTCG AGAAGGCGCC AACCTGATGG GCGGCATGGT CGATAACATG
AAAGGCATGT TTGGTGCTGC TGGCTCTGGG GCACAACGTA CCCCTGGCGT TAAAATGCAA
CCTAGGAAGC CTGGCGCAGG GGGCAATGGG GATGGAATCC AGTAG
 
Protein sequence
MNLIKRFWWM GLLLVFSVPV LADNVDYQTI AAASQKPNDL SRQAMVMIMG QVAVDPFAPS 
QPTLIGSLFA IINGVLAVMA LFWFLTITLK TIVKAGHQGQ FFAGGRSALY PIMTFAGFIM
ILPTQSGWSL AQLVMVWACS TMGVGSANLL TDKAVDMMDS GYSMVTQPTA PSTRSAARGI
FEMNLCKYAI NRELESLYAD GVANTPLITT KGGNGQYDTG NGSAVCGSAK TPNTGRTGTW
NLLFDSDVDT SGVITAQHQA LDTMQSTLDQ AAQAFVDTYL SKRDQDTGSF QDAETQIQNA
AAAYENTVNL ALNKIDFKDT LQSQLSSQIK SSGWVALGSW YHTFATANNK TNDVASSTPV
VTGMSNLGEH GTGDLYNQVF AAYKSQVQNS TYTAPLGTQT TKDDGAAATA NDPNAVFVGI
FKSPMQKLTS LFATGKIGTD ASFSNQVNPL IKMQTIGDYT LGTVETLMVA YAGTWAAASS
ASNSPLGWGA KIFSVDVGAV VKDVLGALAP MFYFVMFALL AIGFSLAVFL PAVPFLFWMV
GIFNWVVSVL VGCAAGSMWA ATHLGAEEDK GSRSTYGYIF LIDMMLRPSL MVLGFFFASV
AVIGGGTILN LLFASALANA NADSIVGLFK MIGWLMIYAR IATFGVTRLF GLQASLADYV
ISFLGGREGA NLMGGMVDNM KGMFGAAGSG AQRTPGVKMQ PRKPGAGGNG DGIQ