Gene PSPTOA0054 details

Gene Information

• Locus tag: PSPTOA0054
• Symbol: traP-2
• ID: 1187344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004633
• Strand: +
• Start bp: 55584
• End bp: 56249
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637408387
• Product: traP protein
• Protein accession: NP_808712
• Protein GI: 29171528

Plasmid Coverage information

• Num covering plasmid clones: 58
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGCTC CCACCCAGGC TCCCAGTCGT AGCGTGTGGC AACGCCCGAT CGTCATGGGG 
CTTTCACTTC CCTGGCTGAT CGGCATTGCC CTGGTATTGG CACTGGCTGG CTGGTACTTG 
TTTGGCCCCG AGAAAACCGC GTCAGTCAAT CGTCTGGCCT TTGAAAATGA CTTCGAACAG 
CAACCTTTGC CCGCTGAACA GTCGAGTACC CCCCCTGTTG CAGCCGCTGC CGAGTCTGAT 
TTGGGCCAGT TCAAGAACGA GGTTGCGGCC ATGATCGGCG GGGTGCGTAC CTACGCAGAG 
GTGAATCGCA CCGCGATCCA GCGCTTGTCC GAAACGATCA AGACTCAGGG GGTTGCACAA 
CAGGCGTTGC AACAGCAACT GGCCGAGGCA CAAGCGCAAA ACAGCGTCTT GTCAGCACGT 
CTGTCCTTCC TTGAAGGACG ACCCGGCGCG ACGACCACGA CACAGCAGGC CAGCAAGCCA 
GTCGCTAAAA CACGTTCGCC GTTGAATGGT ATGCGCGTGC AAGCCATTCA GAACGGCATG 
GCCTGGGTGT ACTGGCAGGA CAAGACCTGG GCCGTCAGTC CCGGCGAGAA ACTGGGCCAG 
GTGACTGTCA CCGGCATCAA TCCCCAGGCC CGCGAAGTGC TGACCAGCGC GGGCACAATC 
AAATGA 

 

Protein sequence

MPAPTQAPSR SVWQRPIVMG LSLPWLIGIA LVLALAGWYL FGPEKTASVN RLAFENDFEQ 
QPLPAEQSST PPVAAAAESD LGQFKNEVAA MIGGVRTYAE VNRTAIQRLS ETIKTQGVAQ 
QALQQQLAEA QAQNSVLSAR LSFLEGRPGA TTTTQQASKP VAKTRSPLNG MRVQAIQNGM 
AWVYWQDKTW AVSPGEKLGQ VTVTGINPQA REVLTSAGTI K