Gene PSPTOA0044 details

Gene Information

• Locus tag: PSPTOA0044
• Symbol: traI
• ID: 1187334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004633
• Strand: +
• Start bp: 43753
• End bp: 44553
• Gene Length: 801 bp
• Protein Length: 266 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637408377
• Product: relaxase
• Protein accession: NP_808702
• Protein GI: 29171518

Plasmid Coverage information

• Num covering plasmid clones: 69
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAAAT CAATTCTGAC GCTTGTCCTG TTGCAGGGCC TGCAAGGGTG TGGACATACG 
CCACCTTCCA CACCCGCCGA CACGCCGGCG CCACTGGAAA GCTATCTTGT CCCCGCTGAC 
CCGCCGTCAG CAGACGTGAC CGAATCGCGG CGACAACTGC TGGAGGAATC GGGACGCAAT 
ACAGGGTTTC GTGGCGGTAA GGCTGAGCGC GTGTGGGAAT TACGCCAGGC ATTGGAGGGG 
CAGATCGGAC GGCTCAACAC CTTGTATGAC TTTCGGACCC TGATCAGCCG TGAGGGCTGG 
CTACCGCCAG TCATCGACGA GGCGGTGGAC GTGGCCCATA TCACGCCACG GCAGATACGC 
ACTGCAAGCC ATGTTTACGA AATCATTGTG CCCGAACGGT TCGTCAGTAA CCCACCGTCG 
TGGCGTACCT GGTTGATGGC GGGCCTGTCA TCGTCGGGCC CTGATGAAAC CGTGGCAGTC 
ACACCTGAAA ACCGTTTGCA GAAGGCGCTT TGGCAAGCGG CGGTCCGCCA GGGCTGGGGT 
GAAGGGCGGC AAAGTGCCGA TCAGACCCTT GAAGCCAATT TCAACCGCCT GACCCGAGAT 
TACCGGGGCA TGCTGATGTA CTCGCAGTTA CTGCGCCAGG GGTTCATCAC GGCGCCGGTA 
GTCACGGATC AACAGCAGAC CGTGACGGGG GATCGGCAGA AGCTGACCAC CGGCGATCGC 
GTACGAAGCC TCAAGGAGAA CGCCGGCTTT GTTCCCGACA AAACTCAGTG GCATCCGGTG 
ATACGCAAGG TGCAGCCATG A 

 

Protein sequence

MKKSILTLVL LQGLQGCGHT PPSTPADTPA PLESYLVPAD PPSADVTESR RQLLEESGRN 
TGFRGGKAER VWELRQALEG QIGRLNTLYD FRTLISREGW LPPVIDEAVD VAHITPRQIR 
TASHVYEIIV PERFVSNPPS WRTWLMAGLS SSGPDETVAV TPENRLQKAL WQAAVRQGWG 
EGRQSADQTL EANFNRLTRD YRGMLMYSQL LRQGFITAPV VTDQQQTVTG DRQKLTTGDR 
VRSLKENAGF VPDKTQWHPV IRKVQP