Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0042 |
Symbol | pilT |
ID | 1187332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | + |
Start bp | 42755 |
End bp | 43246 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637408375 |
Product | pilT protein |
Protein accession | NP_808700 |
Protein GI | 29171516 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 63 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCTGCC TATGGCTGGT TTTGGCATTG TCGGCGCCGA TGCAGGCCTC TGCTTTCTGC TTCCAGGAGG CTGGCCAGCG CTATGGAGTT GATCCGGTGC TACTGCAAGC GATCGGCATA CAGGAAAGTA AACTGCAGCC TGGTGCAGTG AACCTTAACC GCGATTCGTC TGGAAAAGTG CTCAGCACCG ACTACGGCGT CATGCAGATC AGCACGCGCA ACGCTAACCG GCTGGTCAGG ATGGGACTGA TCACGCGAGC GGAGGACCTG CTCACCAACG CCTGCTTTAA CGTTCAGGCG GGGGCTTGGG TACTGGCTCA ACATCTTCGT GTGTGCGGCA ATACCTGGCG TTGCCTAGGT TCGTATAACG CAGGCTTTGA CCCTTCGCAA CGCCAGGAGC AACGGCGCCT GCATTACGCG CAGCAAGTGC GCAACGTCTA CGACCGCCTC AAAGCATTGG GCGCTGCACC GGCCCACCTC GCTATCCGTT AA
|
Protein sequence | MRCLWLVLAL SAPMQASAFC FQEAGQRYGV DPVLLQAIGI QESKLQPGAV NLNRDSSGKV LSTDYGVMQI STRNANRLVR MGLITRAEDL LTNACFNVQA GAWVLAQHLR VCGNTWRCLG SYNAGFDPSQ RQEQRRLHYA QQVRNVYDRL KALGAAPAHL AIR
|
| |