Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTOA0039 |
Symbol | |
ID | 1187329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004633 |
Strand | - |
Start bp | 41032 |
End bp | 41367 |
Gene Length | 336 bp |
Protein Length | 111 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637408372 |
Product | PbsX family transcriptional regulator |
Protein accession | NP_808697 |
Protein GI | 29171513 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 0.81047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGGGG CAAAAATAAA GGCCCTCCGC AAGTCGACAA CCCTGAGCCA AGCTGATTTG GCAGAAATGA TAGGGTGCGA TGCGCCGTTG GTAAGTCGAT ACGAAAGAGG TTCTACGCTT CCAGGTATTG AGCAATTGAT AAGAATCGCT ACAGTTTTCA ACGTCGCACC AGGAGAGCTT CTACCTGGTG GCCAAGATGT ATTACGAACA CGGCTGCTTT CGCTTCGACA AGAAATCACA GAACGCATCG CTGAAGTCGA TTCGCCAGAA TATTTGGAAG AAATGCTTAA CTTCATTAAC AGATACCCGC AGTACGATAA TAAAAATAAG AAATGA
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Protein sequence | MVGAKIKALR KSTTLSQADL AEMIGCDAPL VSRYERGSTL PGIEQLIRIA TVFNVAPGEL LPGGQDVLRT RLLSLRQEIT ERIAEVDSPE YLEEMLNFIN RYPQYDNKNK K
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