Gene PSPTOA0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTOA0039 
Symbol 
ID1187329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004633 
Strand
Start bp41032 
End bp41367 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content46% 
IMG OID637408372 
ProductPbsX family transcriptional regulator 
Protein accessionNP_808697 
Protein GI29171513 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value0.81047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCGGGG CAAAAATAAA GGCCCTCCGC AAGTCGACAA CCCTGAGCCA AGCTGATTTG 
GCAGAAATGA TAGGGTGCGA TGCGCCGTTG GTAAGTCGAT ACGAAAGAGG TTCTACGCTT
CCAGGTATTG AGCAATTGAT AAGAATCGCT ACAGTTTTCA ACGTCGCACC AGGAGAGCTT
CTACCTGGTG GCCAAGATGT ATTACGAACA CGGCTGCTTT CGCTTCGACA AGAAATCACA
GAACGCATCG CTGAAGTCGA TTCGCCAGAA TATTTGGAAG AAATGCTTAA CTTCATTAAC
AGATACCCGC AGTACGATAA TAAAAATAAG AAATGA
 
Protein sequence
MVGAKIKALR KSTTLSQADL AEMIGCDAPL VSRYERGSTL PGIEQLIRIA TVFNVAPGEL 
LPGGQDVLRT RLLSLRQEIT ERIAEVDSPE YLEEMLNFIN RYPQYDNKNK K