| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTOA0017 |
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| Symbol | shc01 |
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| ID | 1187366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004633 |
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| Strand | + |
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| Start bp | 19718 |
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| End bp | 20146 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637408351 |
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| Product | type III chaperone ShcO1 |
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| Protein accession | NP_808676 |
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| Protein GI | 29171492 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 0.15767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCACAT CCGTTAATGG TCTGCTTGAG CACAGCCTGA AGACCCTGGG CTTTGATACT
TCGGCATTGC AGGCCTTGCG CGACGACGGT TATTTACTGT GGCAAGGCAA GGATAAGCAA
GCCAGTCTTC TGGTTCCCTC TACTGACGGC GACGCGCTTT TCGCTATCTG TACCTTGAGC
CGTGTCGATC CCGAGCACGA CGGACGTCTG CTGGCGCTTG CATTGCACCT GAACCTGTCT
CCTGTCCACA CGATGAGCGC ATGTATAGCA CTTGATGTCG AGCAAAACAC GTTGTGTCTT
CGCTACACCC ATGACCTTGG CGGGAACGGG GCAGATACCC TGTTGCTTGC GCTCGAAAAC
GCCCAAGCGC TTGCTGAACA GATCAAGCAG GTAATCGAAA ACTTTAGGCA CGATCAGGGA
CGCCGATAG
|
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| Protein sequence | MRTSVNGLLE HSLKTLGFDT SALQALRDDG YLLWQGKDKQ ASLLVPSTDG DALFAICTLS
RVDPEHDGRL LALALHLNLS PVHTMSACIA LDVEQNTLCL RYTHDLGGNG ADTLLLALEN
AQALAEQIKQ VIENFRHDQG RR
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