| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTOA0004 |
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| Symbol | |
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| ID | 1187311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004633 |
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| Strand | + |
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| Start bp | 2530 |
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| End bp | 3540 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637408339 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | NP_808665 |
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| Protein GI | 29171481 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 60 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCTA TTGCCTCTTA TGAGCACGTG CTTCACCGCT ACCCCAGCGT TCAGCAATGG
CTGGCGCTGC TCGGTAACCT GGGAAGAGCA CCGGCTACCT TGGATGCCTA CGGCAGGGGA
TTGGCGCATT ACTTGCTCCA CTGCGAAGCC TCCGGTCTGG AGGCTGAATC CATCACATTT
GAGCAAGTCA CGCTCTACAT CCGTCGGCTA CTGCCCGGGC AAGAAAACGC GGTGGCGAAT
TCGACCTTGC ACCAGCGCCT CACCGCGATC CGCCTGTGGT ACGACCACCT GGTGTTTCAG
GGGCGTTGCG CACAGAATCC GGTACCTCGC GGCCAGCACG GCCGCCTGTG TCAGATCCCT
GGACATTCAG GCTTTATGAG AGGGCTGGTG CCTCGCCTGA TAAAGCTGCC CGACATCCCC
TCGGATGAGC AGTGGCGTTA CTTTCTCAGC ATCGCGGCCA GGTCGTCTAT TCGTGATCGA
CTTATGCTCT CGTTGGCATA CTGCGGTGCG CTCCGTCGTG CCGAACTGGT GGGCCTGAGA
ATCGAAGACC TGGATCTCGC CCATCGACTC ATTTCAGTGC GCGCAGAAAC GACCAAAGGC
CGACGCAGCC GTGTCGTGTG CTACAGCCCT GACATTGCGC CGATACTTGG AACGCATCTT
CATGCCCTTC GTCTGGCCGG TTGGTCGAGA GGAGCCCTGT TTCGATCCGA GTCTGATCGC
AATCGAGGTT CGGCACTCAC GCGGTGGACG TGGAGTAAAA CGGTAGAAAG ATGGGCCACG
GACTCAAATC TGTCATGCCT GAGTACACAC ACTTTTCGTC ATCTGCGACT CACGCATTTG
GCTCGTGCGG GGTGGAAACT GCATGAGTTG ATGGCCTATG CAGGTCACCG GGATCCGAAG
ACCACCTTGA TTTATGTGCA CCTGTCGGGC GCGGACCTGA CTGCAAAAAT GGCGCATTCG
GTGGGTAGTC TGGACGCCCG ACTGTTCGCT GAACTCTTCA AGTCGGAGTA A
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| Protein sequence | MASIASYEHV LHRYPSVQQW LALLGNLGRA PATLDAYGRG LAHYLLHCEA SGLEAESITF
EQVTLYIRRL LPGQENAVAN STLHQRLTAI RLWYDHLVFQ GRCAQNPVPR GQHGRLCQIP
GHSGFMRGLV PRLIKLPDIP SDEQWRYFLS IAARSSIRDR LMLSLAYCGA LRRAELVGLR
IEDLDLAHRL ISVRAETTKG RRSRVVCYSP DIAPILGTHL HALRLAGWSR GALFRSESDR
NRGSALTRWT WSKTVERWAT DSNLSCLSTH TFRHLRLTHL ARAGWKLHEL MAYAGHRDPK
TTLIYVHLSG ADLTAKMAHS VGSLDARLFA ELFKSE
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