| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_B0077 |
|---|
| Symbol | |
|---|
| ID | 1187455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004632 |
|---|
| Strand | + |
|---|
| Start bp | 66984 |
|---|
| End bp | 67412 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637408336 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | NP_808662 |
|---|
| Protein GI | 29171616 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 0.672026 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAACC GCAAAACGCA GAAACTGCAC GCGCAGCACG TGCTCGAAAC CATAGCCCTC
GGCATTGCAC GGCCTGTAGC GCTGCCCCGG GAGACAATTG AAGTGGCGCT TCGCGAAGCC
ATCATTGATG GGCGGCTTGA ACCGGGTGAA CCCCTTACGC ATCAAGCCAT CGCCAATGCC
TTCCAGGTCA GCCGTATGCC TGTGCGCGAA GCGCTGCGTT CGTTGGAGAC GCAGGGCTAT
ATCGCCGCGC AGTACCACAA AAGCTACCTA GTCACGAACG GCAATGAGCC TCCCCAGTAC
GGTCACCTGC CGGGCTTGCT GAGGTGCGTT GCAGAACGCC ATACAAAGCT GGGCGATTTC
GAATCAAAAG TGGCCTTTGA AAACGAAATC CTGCGTGTCC TGGGTCAACT GCGCCCTACC
ACGTGCTGA
|
|---|
| Protein sequence | MSNRKTQKLH AQHVLETIAL GIARPVALPR ETIEVALREA IIDGRLEPGE PLTHQAIANA
FQVSRMPVRE ALRSLETQGY IAAQYHKSYL VTNGNEPPQY GHLPGLLRCV AERHTKLGDF
ESKVAFENEI LRVLGQLRPT TC
|
|---|
| |