| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_B0073 |
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| Symbol | |
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| ID | 1187451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004632 |
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| Strand | - |
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| Start bp | 62879 |
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| End bp | 63256 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637408332 |
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| Product | PilT domain-containing protein |
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| Protein accession | NP_808658 |
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| Protein GI | 29171612 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATAGGCG TCCTGGTAGA CACCTCCGTT TGGGTTGAAC ACTTTCGCAA CAACAGTCCA
GAACTGGTGA ACTTGCTCAG CCAGGACCGG GTACTCATAC ACCCCATGGT GATCGGAGAA
CTGGCGTGTG GTACGCCGCC TGATCGTTTG AGCACCTTGA CTGACCTTGG CGACCTACGA
GGTGCACAAC AACCCACGGT GAGTGAAGTC ATCGCCTTTC TGAACACCCA CAAGCTCTAT
GGCCTGGGCT GTGGGCTGGT GGATATGACG CTCCTGGCCT CCGCGTTATT GAGCGGCACA
GCGCTTTGGA CGTTAGACAA GCGCCTGGAG CGTTTGGCTA GCCGCATGGC CGTGTCTTAC
CAGCCTCCTA CTCACTAG
|
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| Protein sequence | MIGVLVDTSV WVEHFRNNSP ELVNLLSQDR VLIHPMVIGE LACGTPPDRL STLTDLGDLR
GAQQPTVSEV IAFLNTHKLY GLGCGLVDMT LLASALLSGT ALWTLDKRLE RLASRMAVSY
QPPTH
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