Gene PSPTO_B0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0072 
Symbol 
ID1187450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp61687 
End bp62889 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content59% 
IMG OID637408331 
Producthypothetical protein 
Protein accessionNP_808657 
Protein GI29171611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAATC GACAATCCCA AGGTGCATGG GAGGGTGAGC AAGCGCAGAT GTTATTGGCG 
CTTTGTGCAG CCGTCCTGTT GTGCTGGATG TTCTTCGATA TCTTCGTGTA CTGGACCACC
TGGACGCTCT ATTGGTTATG GAAAATGGTG GATTTTCCCT TCATCCATGC CTGGGCCGGT
GGCAAGATCA ACCTGCTGGC CGACGTGGCC AACCACGCCA AGGCCGTGAC GCTGGATGAA
TGGCTTGAGG TGATGAACGC CACCAGTGGG ATTCTGCTGC TGTTCTTGAT ACCGCTGGTG
ATTGTGAGCA GTTGGGGGCT GGCGCAGCAT CCGGTACTGC CGTTTCGCAG TAAACGCCTG
GTGAACATTC ACACCCTTCC TGGCCTGGTG AGTCGTTTCG CACCCTCGGT CATCCCGGTG
TTGGCTGCGT CTGGTCCCGA TGGCCTGATG AACGATACCT CTCCCAGCAA TGCGTGGGCG
CTAAAGCCCG AGGAGTTTGC TGAACGTTAC AACCTGGTGC AGCGCAAAGT GCTGGATCGG
GAGGCCGCTC GTGCGGTGTT CGAGGAGCAG GTCGGAGATG TTCATGATGG CCTTCTGGAC
TTGACACCCT ATGAACGGGC CTTGCTGGCC GTATTCGGTC TGCAGGTTTT CCTCAATGAC
CGCAAGGCAG CGACCCGGTT GCTCGATGAC CTGAACCGTT CCTGCATGAT CAAGGGGTTG
TTGCGGCGCA AGACCTTCTC GTTGACGCCG CTGTACGGCT TGGCCGATGC GGGGTTTGAT
CGCGTTGCAA AAGCACCGGG CGTCAGTGAG TGGCTGCAAA GCCATAGATC GATGCGCACC
GCGCTGGTGG CCTTGTATGG CCGCGATCTG CGCTTGGCGC CGGCGCGCTT TCGCTGGCTC
AAGGGGGTTA ACCGTACTTT GTGGTATGCC CTGCACAGTG CCGACACGGC CAAGGTGTTT
GTGGAAGGCG CCGGTGTTCA GGCTCAGGCG CGGGCAGAAG TCCATGCCAG AAAGCTGGGG
CTGCCACGTC CTGGGTTGAT GGTGACCCAG GCCATCGATG GCTTGCAGGC CGAGTTGGAA
AGCATCGGTC TGGTATTTGC GCGACATGTC ATCACGCCTA AACGCCGGGA GGCCTCTGAC
CTTCCTGTCA TGACGGCGGT GTATGCCGCG CAGCCACCTG TGGGTGATGA GCCTAGTGAG
TAG
 
Protein sequence
MQNRQSQGAW EGEQAQMLLA LCAAVLLCWM FFDIFVYWTT WTLYWLWKMV DFPFIHAWAG 
GKINLLADVA NHAKAVTLDE WLEVMNATSG ILLLFLIPLV IVSSWGLAQH PVLPFRSKRL
VNIHTLPGLV SRFAPSVIPV LAASGPDGLM NDTSPSNAWA LKPEEFAERY NLVQRKVLDR
EAARAVFEEQ VGDVHDGLLD LTPYERALLA VFGLQVFLND RKAATRLLDD LNRSCMIKGL
LRRKTFSLTP LYGLADAGFD RVAKAPGVSE WLQSHRSMRT ALVALYGRDL RLAPARFRWL
KGVNRTLWYA LHSADTAKVF VEGAGVQAQA RAEVHARKLG LPRPGLMVTQ AIDGLQAELE
SIGLVFARHV ITPKRREASD LPVMTAVYAA QPPVGDEPSE