Gene PSPTO_B0071 details

Gene Information

• Locus tag: PSPTO_B0071
• ID: 1187449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004632
• Strand: +
• Start bp: 60947
• End bp: 61594
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637408330
• Product: surface exclusion protein, putative
• Protein accession: NP_808656
• Protein GI: 29171610

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTTC AGCGCCTGAA AACAGCGAAA GAAGGGTGGC TCGTGGTCTT CAAAGGGCTT 
TATTTGTTAG CGTTTCCATT TTTGCTCATA TTCGCAATTT TGTTTTTGAT CGCGGCTTCG 
GGTTCAACTG GTGAAGATGC TTACGGATTT TCTGTATTTG CTGCACTGTT TGCGGCCCCT 
GTTTTGGTCT CTTTGACCGT TTTCATCCAT GGAATTTTAA GTCGCCGCCG TCTACTGAAG 
CGAATTACGA CGGCTATCAA AGCTGCCCAG TTCTTTGAAC CAGACGTTGC CAATGAGATT 
TATCACGAAG GTGATGGCAA ATACCTGGGC ATCGATACCC AAAACGGCAC CATCCTGTAT 
GTTCACAGGA TTCGCAAAGG TCAGGTCGAT GTGGTGGCCC TGACCATGGA CGACTGGACC 
GACCGCGAGG TTGAAGGCAA TGGCATGTTG CGCCTCTACA CCAAGTTCCC TGACCTGCCG 
CGTATCGAGA TCGCCACCCC ATGGGCGCAA CGCTGGTACG ACACGCTCGG GGCTATGGAG 
CACAAGCAGA AGCAGTACAG CACCCCGCAA CCGTTCAACC GCTATGTGCA TGACCACCTC 
GAAGCGCTTG AACGTGATCT GAACGTGCAG ATCCCACGCC TGGCGTGA 

 

Protein sequence

MKVQRLKTAK EGWLVVFKGL YLLAFPFLLI FAILFLIAAS GSTGEDAYGF SVFAALFAAP 
VLVSLTVFIH GILSRRRLLK RITTAIKAAQ FFEPDVANEI YHEGDGKYLG IDTQNGTILY 
VHRIRKGQVD VVALTMDDWT DREVEGNGML RLYTKFPDLP RIEIATPWAQ RWYDTLGAME 
HKQKQYSTPQ PFNRYVHDHL EALERDLNVQ IPRLA