Gene PSPTO_B0068 details

Gene Information

• Locus tag: PSPTO_B0068
• Symbol: traX-1
• ID: 1187446
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004632
• Strand: +
• Start bp: 57825
• End bp: 58427
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637408327
• Product: traX protein
• Protein accession: NP_808653
• Protein GI: 29171607

Plasmid Coverage information

• Num covering plasmid clones: 51
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACTG AACCTGACAC AACAAAGCAC GAGGACGAAC AATCGCCGCC GGACGACAAG 
CATTCGGGCA CACCGTTACG GCGCGCCGGT CATGTGGGGC TGTCGATCCT CAACCCGTTC 
TCTGACCTGG CGGTGATCTA TCGCCGGGGC ATAAAACCGA CGGCGCAAAA GCTGAAGCTA 
CTGAAGACGT TGCTGACCCC GGCGTCAGCA ACGACTGAGG CAGATGCAGT CGGTGTCAGC 
TGGGTACAAG CAGTCGAGCG TTCCAGCAGA TCTGTTGAGC AACTGGTGAG GTCCTACCAG 
CGCATTCGTG CTGCATGGTG GTGCTTGATG GCGAGTGGTG GGGCCTTGAG CCTGTTCCTG 
CTGATCATGC TGCTGTTGGC AAACCTCAGC TTGCCTTCGG GCACATTCCT GCGGGCTGCG 
GTGACACTGC TTTTATTGAT GGCTCTGGCC AGTTGGGGGT TTGCGCAGAC GCTAATCGCC 
ACTTACCGGC TATGGCAGTT GCGGGAACGG CGCGTCAGCG TAGCGGAACG AGGCACCTTT 
GAAGATTTCC TCATCGAAAA CCGATGGTGC CGGCAGGTAC TGACGCTCGG TCACTTCGGC 
TAA 

 

Protein sequence

MKTEPDTTKH EDEQSPPDDK HSGTPLRRAG HVGLSILNPF SDLAVIYRRG IKPTAQKLKL 
LKTLLTPASA TTEADAVGVS WVQAVERSSR SVEQLVRSYQ RIRAAWWCLM ASGGALSLFL 
LIMLLLANLS LPSGTFLRAA VTLLLLMALA SWGFAQTLIA TYRLWQLRER RVSVAERGTF 
EDFLIENRWC RQVLTLGHFG