Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0063 |
Symbol | traQ-1 |
ID | 1187441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 51873 |
End bp | 52415 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637408323 |
Product | traQ protein |
Protein accession | NP_808649 |
Protein GI | 29171603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGCA GTACTGACGC GATTCAAATG TTGGTCAATC TGTCCCACAA CCTGCTGACT TCCTTAGTCA ACTTTGCCTT CACGCTGGGC AGCTTGTTTG CGGTCACTGG CGCTGTGAGC TACCTCGCCA CTCACGCCAG TGCCGCGCGC AAAGCACCTG GCCATGCGGA AGGTGGCGGC AAGGTCATCG CTGTGTTGTT GCTCTGTGGA GGCCTGGCCG GCCTCGATCA AATGATCGGT GCTGCCGCTC GCCAGTTGGG TTGGCAGGGC GCGACCTTCG ATGCCATCAG CTACGTGGAC GTGGGCACCT TTGGTGTCGC AGCCGATGCG GCCAATGCCG TGTTAAGTCT GGTGCGCATG CTGGGCGTCT GGTTCGCGCT GCAAGGCATG TTGTCCTGGA AACGCTCGTT CAAGGACGGT CATACGGGCC TATCGGCCAG TCAGGACGTT TCAAGCGGTA CCCTCAAGTT TGTCCTGGGC GTTTTCTGCG TATGCAATCC GTACCTGCTT AGCGCCCTGC AAAAAACCCT CGGCCTGCTG TAA
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Protein sequence | MDGSTDAIQM LVNLSHNLLT SLVNFAFTLG SLFAVTGAVS YLATHASAAR KAPGHAEGGG KVIAVLLLCG GLAGLDQMIG AAARQLGWQG ATFDAISYVD VGTFGVAADA ANAVLSLVRM LGVWFALQGM LSWKRSFKDG HTGLSASQDV SSGTLKFVLG VFCVCNPYLL SALQKTLGLL
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