Gene PSPTO_B0062 details

Gene Information

• Locus tag: PSPTO_B0062
• Symbol: traP-1
• ID: 1187440
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004632
• Strand: +
• Start bp: 51154
• End bp: 51864
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637408322
• Product: traP protein
• Protein accession: NP_808648
• Protein GI: 29171602

Plasmid Coverage information

• Num covering plasmid clones: 65
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGT TCAGTCCAGC AGAGCCCAAG GCATCGACGA TTGAAATGCC GGCTCCCACC 
CAGGCTCCCA GTCGTAGCGT GTGGCAACGC CCGATCGTCA TGGGGCTTTC ACTTCCCTGG 
CTGATCGGCA TTGCCCTGGT ATTGGCACTG GCTGGCTGGT ACTTGTTTGG CCCCGAGAAA 
ACCGCGTCAG TCAATCGTCT GGCCTTTGAA AATGACTTCG AACAGCAACC TTTGCCCGCT 
GAACAGTCGA GTACCCCCCC TGTTGCAGCC GCTGCCGAGT CTGATTTGGG CCAGTTCAAG 
AACGAGGTTG CGGCCATGAT CGGCGGGGTG CGTACCTACG CAGAGGTGAA TCGCACCGCG 
ATCCAGCGCT TGTCCGAAAC GATCAAGACT CAGGGGGTTG CACAACAGGC GTTGCAACAG 
CAACTGGCCG AGGCACAAGC GCAAAACAGC GTCTTGTCAG CACGTCTGTC CTTCCTTGAA 
GGACGACCCG GCGCGACGAC CACGACACAG CAGGCCAGCA AGCCAGTCGC TAAAACACGT 
TCGCCGTTGA ATGGTATGCG CGTGCAAGCC ATTCAGAACG GCATGGCCTG GGTGTACTGG 
CAGGACAAGA CCTGGGCCGT CAGTCCCGGC GAGAAACTGG GCCAGGTGAC TGTCACCGGC 
ATCAATCCCC AGGCCCGCGA AGTGCTGACC AGCGCGGGCA CAATCAAATG A 

 

Protein sequence

MSEFSPAEPK ASTIEMPAPT QAPSRSVWQR PIVMGLSLPW LIGIALVLAL AGWYLFGPEK 
TASVNRLAFE NDFEQQPLPA EQSSTPPVAA AAESDLGQFK NEVAAMIGGV RTYAEVNRTA 
IQRLSETIKT QGVAQQALQQ QLAEAQAQNS VLSARLSFLE GRPGATTTTQ QASKPVAKTR 
SPLNGMRVQA IQNGMAWVYW QDKTWAVSPG EKLGQVTVTG INPQAREVLT SAGTIK