Gene PSPTO_B0059 details

Gene Information

• Locus tag: PSPTO_B0059
• Symbol: traM-1
• ID: 1187437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004632
• Strand: +
• Start bp: 48001
• End bp: 48678
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637408319
• Product: traM protein
• Protein accession: NP_808645
• Protein GI: 29171599

Plasmid Coverage information

• Num covering plasmid clones: 73
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAGAGT CTCTGGAAAT ACCTCACCTC CCCACGGCGG AAGATCAGCA CACGTTCGAG 
CATGCCATGC AGTTGCAGCG TGACCGTGCG TTAGGTGCGG CATTCGCCCA TCGCTGTCTG 
ACCGCAGTGC TCTGGATGGC ACCTGCACTG GTGCTATCGG TCAGCGTGAA TGGCTACTTG 
GGCTGGCAGG TCGCTCATCC TCCGGTGAAG TACTTCGCGG CCGAGGGTGG TCGCGTGACC 
AAGATCATCC CTACGGACAA ACCAGGGCAT AGCAGGCGTG ACGTGTCGGC CTTTGGGGCC 
GACACCATTC GCCAGAGCTT CACTCTGGAC TTCGTGCATT ACCGCGATCA GATGACCCAA 
CTGGGCGAAC GCTACTCGGA AGTGGGCTTC CAGGACTATT ACAAAGCCTT GGTGGCCTCG 
AACCTGCTCA AAGCGGTCAA GGATCAGCGC ATGAACCTCT GGGTAGACGT TGGCCCAGGT 
GTGATTCGCG GTAGCGGGAC GATCGGGGAC AAGTTTGCCT GGGAGTACCA GTACCCGGTG 
ACTTTGAAGC TGGATGGTCA GCAATCGGGC AGTCCGCCTC AGCGCTTCAT TTTTACTCTG 
CGCATTCAGC AGACGGACGT ACGCGTGAAA AACGCAGGAT TGGAAGTCAC GCAAGTGATT 
ACCACCAACG CTAACTGA 

 

Protein sequence

MEESLEIPHL PTAEDQHTFE HAMQLQRDRA LGAAFAHRCL TAVLWMAPAL VLSVSVNGYL 
GWQVAHPPVK YFAAEGGRVT KIIPTDKPGH SRRDVSAFGA DTIRQSFTLD FVHYRDQMTQ 
LGERYSEVGF QDYYKALVAS NLLKAVKDQR MNLWVDVGPG VIRGSGTIGD KFAWEYQYPV 
TLKLDGQQSG SPPQRFIFTL RIQQTDVRVK NAGLEVTQVI TTNAN