Gene PSPTO_B0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0058 
SymboltraL-1 
ID1187436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp47621 
End bp47974 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content60% 
IMG OID637408318 
ProducttraL protein 
Protein accessionNP_808644 
Protein GI29171598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA GCATGTGCGG TGCACTGCTG ATGGTTGTGT GCTGCCTGCC CGTTGTGGGA 
AACGCAGCAG TGTGCCGCTC AGGACAAGCG GCCAGTGTGG GCAGTCAGAC TGCGTATGAG
CGGGCCAAGA AGGCGTCGGA CGTGTGGGCA GAGCGCGAGC GCACCGTCTC AGACGAACTC
CAGGATTGCT TGTCGCGCAT TCGCACCACC AGCATCAGCC TTCCCTCGTT TCCAAGCCTG
GAAGACCTGA TGAACCAGGT GGCCGATCAG GTATGCCAGG CGGCGGTGGA CAAGATCAAC
AGCCATATCC CCAGCGGCTC GGACCCTTGG CAGTCGGTAG GAGGTTCATT GTGA
 
Protein sequence
MKKSMCGALL MVVCCLPVVG NAAVCRSGQA ASVGSQTAYE RAKKASDVWA ERERTVSDEL 
QDCLSRIRTT SISLPSFPSL EDLMNQVADQ VCQAAVDKIN SHIPSGSDPW QSVGGSL