| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_B0057 |
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| Symbol | |
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| ID | 1187435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004632 |
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| Strand | + |
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| Start bp | 42922 |
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| End bp | 47595 |
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| Gene Length | 4674 bp |
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| Protein Length | 1557 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637408317 |
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| Product | DNA primase TraC |
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| Protein accession | NP_808643 |
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| Protein GI | 29171597 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4643] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTAA CCATTGATCA TGCGAAAAAG TTAGTGATTG AATTCTGTGC GACCTACCCG
GTAGCGTCCA CCATCAGCTA CAAGATCAGA GAAACCCAGG AGGAGCTTTA TGGACCGCAA
GCCACCCGAG AAGCCGCTGG AATCATCCTC GGTTCATTTC GTCCAGGAAG AGGACGAGCC
GAATTTGCCA TTTCCAACTT TCGTGACGAG GACCACTTTA GAAGAACTCT TAGGCACGAA
ATACTCGGAC ATTATGGGAT CAACACCTTC AACCCCGCCG AAAAACGAGC GGTCCTAGAA
GGCGTCATCC AGTCACGCAA TGATCCGGGC ATGGCTGCTC TCTGGGCTGA GGTTGCCAGG
ATTTATCCTC AGTTGACTGA CTCAATGAAG GCAGAGGAAG TTTTTGCTTT TGCCTGTGAA
AGGATTGTTT CACCAATCCG TGGCAACGTT GCCGAGGGTG CCCGTTCTTT TCGCGAAACC
TGCATAGAGC GTACGCGTGC GATGCAGGTC AGTGACCTCA TCAACCTCAC GACGATGGTG
GCCGAAGGGT TGCACGACCG CAGCCGGTCG CAACAGAACT TCCCAGCGTC GGACAATGCC
CAGTTCAAGA TCGAAACAGC CCCTCGCACA TCCGAATACC CGGTTTGGCT GGCCGTGCCG
CCTGATGATC GTGATAAGGC TCGACTGTCT GCCGGACGAC TCAGTGACGG TCGTGCGGCC
ATTGCCTGGA ACAAAGAGGA AAAGCTGTGG TTTGCCAGAC CTGGATGTGA CCTTGATCGC
ATCACCGACT GGTTGCCTGA TCCAAGCCGC CGCGCTGGGG GAGGGGACGC CGAATCAGAG
TTTCTGGATG TACTGACTCA AGCCGGCCTG GTCGTCAAAG GCATGCCGGT GATGAACGGT
AGTCGGCAGC GTGTAGCGAC GGTCGATGAC AAGCACGGCA AGAAAAGCGG TGTCTATTGC
GGTTTTCTGG ATCGTCGCCC TGCTGGCTGG TTCATCAACT ACCATCGTGC CGATTCGGCC
AAGGATGTGA CCAACTGGGC GGCGACTGGC GGTGAGTCTG ATCCGATCAC CCGCCTGCAC
ATTAGGGCCG GGGCCAAGCA AGCCCAGGAA GACGCTGCTC GTGATCGCGC CGTCACCTAC
GCCAAGCAGA CGTTGGCTGC CAAGAGGCTT TACGACCGGC TGCCCGCCGC AGACCCTGCG
CATCCCTACC TGGTGCGAAA GGGAATACCC CCGACGCCCG ACATTCGTCA AACACGAAAC
GGTGCCCTGG TGGTGCCGTT TTTTAATGCG TCGGGAACGT TCAAGACGCT GCAGTACATC
CCACCCGAGG GTGAGAAGTT CCTCTTCAAG GATGCCCCCA AACAAGAGCA TTTCCTGGTG
GTGGGCGGCC CGCTCGATCC GGTCAACCCC ATCCTGTATG CCGAGGGCTA TGCCACGGCG
CGCAGCCTGA ATCTGGCCAC CGGCCTGCCG GTGGTGATGA CCATTGACGC CGGCAACATG
GTGGCGGTGG CCAAGGTGCT GCATCAGCAG TATCCCGACA GTCGGCACCT GTTCATGGCG
GATTTCGATC ATGCCAAGGA CGTGAACAAG GGGTTGATCA TGGCCAATGA GGCGGCCATA
GCGGTGGGGG GCCAGGTTAT GTACCCAACG TTTAACGACG CCGAAATCGC CCGTGGGTTC
ACGGACTTTA ACGACCTTCA CCAATCACGA GGATTGGACG CGGTACGCGA ACAGACCGCT
CCCCTGATTC GACAGTATGA AGAGGTAACT GCCATGCCGA CAGATTCGAA TACCCAAGCA
CAGGATGTCG CACCTGCCAT GCCGATACCG GATGAAGCGG TGCAGCCGCA GGCCGACCTG
GTGCAATCTG GCGACCCAAC ATCAACGGCT GAGAGTGAGG ATAAGCAAGC CAAGACCTTC
ATCTTAATGG ATGCAGACAA CGGGATGGTT TGGGACGGTC AGGCGTTCAA GGCCGCAGAC
CTCGCTGAGG CTGAGCGCTT TACGCCCATT GATGGCTTGA AGGCGGCACT TGAACTTGAG
CACTCCCAAC GGTATGCGCT GGAGGGAGCC GCAATTGAAA TCCACCGCTA TATGCCTGTG
CTTGATGAGA GTGTTCGCGT CATCACTACT AACGCGGCAA AAACCTGGCC GGAATTAAAA
AGTGCTTTCA AAAAGGCGGG CCTGGAGGTT TCGCAAGAAA CCTACCAGTC AATTCGTGAT
GAAGTCGCAG CGAGGCTTGA TCAGTCAAGT ACCCTGCCTG TAGAGCCTGT GACCGAAGTG
CCATTGGTCG TCGGCACTGC GGACGTGCCC GTTCAGCAAC CTGCGGCGGT GATTGAGCCT
GAGAAAACAC CGCCGACCGC ATTGCCCGAA GCCTTGCCTG TAGATGGGCC GCAGCCTGCA
TCAGCGCCTT TGACCGAAAT GTCAGATGAA GCTGCCCAAC CTGCCTCTGC GTCGGTTGAA
GCAGCGCCAC CAGTTAAGCA ACAGACGTCG GCCGAGGCCG ATCCTGACGC TTCCGCGATC
GTTGACGATC AGCCCAAGGC AACAATGCCT GCGGCGTCCG ACCGCAACAC GTCCTCTGAC
GCGCCAGGAC TCAACCGGCC ACCTTTGGCG GCGGCCGAGC CAGAGCAGTC AAACGAGACA
GCTCAACCAG CTGCGCCTCC TGCTAAACAA CAGGCGTCAG TAGAGGCTGA TCCTGACACT
TCCCCCGTCG CTGAGGATCA ACCGATAATC GCACCGGCAG GGCCTGCTCA AAACGAAGAC
AATGAAAGCC TTTCAGACGT GGAGGTTCCG GTGTCAGGGG CCCTGCCGCG TCGTTTCACC
ACAGCACGCA AGACCGGCCC GGCGGTCGTA CCGGATGCTA TCTTCGTAGG GGCTCCGATA
GGTGCCGACG AGCCACAACT GCAAGCCAGC AACATCGACA AAGACGCTCT GTTGGCCCGC
ATCAGCCGTG AGGTTCAAGG TGACAATTCG GTGCTCTACA AGCTCGATGC CGAGCCTGCT
TTCGTTGACC GTGGGTCGCG CCTGGAGATG GTCCAAGGCG CAGGTCAGGA AGATGAGAAG
GTAATAGCTG CGTTGCTCAC GGCAGCACAG TTCTACCGGG GGCGCATCGA ACTGACCGGC
AGTGACGAAT TCAAGGCAAA AGCCATCGAG CTGATTGCTC AGCACCAGAT CAATGTGGAG
ATGAAGAACC CTGCGCAGCA AATGTTGCTG GACGATGCCC GTAACGCGTT GAAGCAGCCA
CCTGTAACGC TTGATGCCAT TCATGGTGAT ACCCCACCGC CGTATGGTGG TCCACAGCCG
TCACAGGCGA AGCCCTCGGC ACCGCAACCT CAACAAGCCG CGCCGGCACC GGTGCATTCG
TCTGCGCCCG CGCCGGCGAG TACCGCTTAC CAGCCTCTGG AGGTTGAGGG TCTGCAACGG
CGGCCGGCTC AATCTGCCCC ACAGGCACAG GCCCCGCAAG CGGGCGTTGC ACCGCAACCT
CAACAAGCCG CGCCGGTACA TTCGTCTGCG CCCGCTTCGG CAAGTACTGC TTATCAGCCG
CTGGACGTTG AGGGTCTGCA GCGGCCACTG GTTCAACCTG CACCACCGGC ACAGCCGGAC
GCACCGGTCA TCAATCCGCC CTCGGCAGCT CCAGCATCGG ATCAGCCTGC AACGTCAGCG
AATCAGCAGG TGTCGCCCGC CATCCATCAG CCTTTCCAGG CGGCCAAGGA TGGCGTGACA
GGCAAGATCC TCAAATTTGG CCAGAAGCCG TTTCGTTTTG AGCCAGACAA GCCCGAGAGC
ACCTTCATCA CACTGCGTAC CGTGAACGGT GTTCAGACTT TTTGGGGCAA GGAGCTGGCG
GGGCTGCTGC GCCAAACCCG TGTGCAGCCA GGCAAGATGG TGACGTTGCA GTGGCTGGGC
AATCATCCGG TTACCGTCAA GGTGCCCCGC AAAAACGAGC AGGGCGTCAC CGTGGGTTAC
GACGATAAAG ACGTTCATCG CAACCAATGG GCCCTTAAGG TAGAGGGTAA CCCCGCAGTG
CGTTCTGGCC AGGATGAGGG CGTCAAACTC GGCGCCTATG ACGCCGGGCG TTTCGCCGTG
GTGCAACAAG CCTGGCTTGC GCAACTGGGC GTGGAGGCTC CCTTGCCCAC GCCACCCACG
GATGGCCTGT ATTGGTTGAC CCCAAACGGT GAAGGCAGCG CAAAAACGGG TGATGAGCTG
TCAGCCCCTC GGCCGCCGAT CGACCCCAAC AACACAGCGG GACAACCCGT CATCAGCAGT
TGGTCACGGG ATGGCCATCT GGACATGTAC CTGGTGCGCG GCGATGGTCC CTATCTGCAA
GGTGTGGTGC GTCAGGGGGA TCAGATGCAG CATGTATTGG TGAGTCTTCC AGGCCGTGAC
GATGGGCCTT CGATGGTGTT TAACGCCATT ACCCCCGAGG GACTGCTGCC GATCGGCACG
GGCAATGGCA TCAACCGCTC TGGTGGCGAG CCGGTGTCGA GAGAGCACAT TGCCTTCAAG
CTTGAAGGCG ACAGCGCTGT GCGCATTGGC AAGCTTGATG CGCCTGGCGA GGTGCCCCCG
ACCTTGCACA ACCTATTGGG CTTCGATCAG CGCTGGAAAG AGGAAAACAC CCTCCCAAAG
TCAGCTCCCA CAGCGGCACC GTCAGTACAG CCGAGCGATC CACGTCCGGT GTAA
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| Protein sequence | MTLTIDHAKK LVIEFCATYP VASTISYKIR ETQEELYGPQ ATREAAGIIL GSFRPGRGRA
EFAISNFRDE DHFRRTLRHE ILGHYGINTF NPAEKRAVLE GVIQSRNDPG MAALWAEVAR
IYPQLTDSMK AEEVFAFACE RIVSPIRGNV AEGARSFRET CIERTRAMQV SDLINLTTMV
AEGLHDRSRS QQNFPASDNA QFKIETAPRT SEYPVWLAVP PDDRDKARLS AGRLSDGRAA
IAWNKEEKLW FARPGCDLDR ITDWLPDPSR RAGGGDAESE FLDVLTQAGL VVKGMPVMNG
SRQRVATVDD KHGKKSGVYC GFLDRRPAGW FINYHRADSA KDVTNWAATG GESDPITRLH
IRAGAKQAQE DAARDRAVTY AKQTLAAKRL YDRLPAADPA HPYLVRKGIP PTPDIRQTRN
GALVVPFFNA SGTFKTLQYI PPEGEKFLFK DAPKQEHFLV VGGPLDPVNP ILYAEGYATA
RSLNLATGLP VVMTIDAGNM VAVAKVLHQQ YPDSRHLFMA DFDHAKDVNK GLIMANEAAI
AVGGQVMYPT FNDAEIARGF TDFNDLHQSR GLDAVREQTA PLIRQYEEVT AMPTDSNTQA
QDVAPAMPIP DEAVQPQADL VQSGDPTSTA ESEDKQAKTF ILMDADNGMV WDGQAFKAAD
LAEAERFTPI DGLKAALELE HSQRYALEGA AIEIHRYMPV LDESVRVITT NAAKTWPELK
SAFKKAGLEV SQETYQSIRD EVAARLDQSS TLPVEPVTEV PLVVGTADVP VQQPAAVIEP
EKTPPTALPE ALPVDGPQPA SAPLTEMSDE AAQPASASVE AAPPVKQQTS AEADPDASAI
VDDQPKATMP AASDRNTSSD APGLNRPPLA AAEPEQSNET AQPAAPPAKQ QASVEADPDT
SPVAEDQPII APAGPAQNED NESLSDVEVP VSGALPRRFT TARKTGPAVV PDAIFVGAPI
GADEPQLQAS NIDKDALLAR ISREVQGDNS VLYKLDAEPA FVDRGSRLEM VQGAGQEDEK
VIAALLTAAQ FYRGRIELTG SDEFKAKAIE LIAQHQINVE MKNPAQQMLL DDARNALKQP
PVTLDAIHGD TPPPYGGPQP SQAKPSAPQP QQAAPAPVHS SAPAPASTAY QPLEVEGLQR
RPAQSAPQAQ APQAGVAPQP QQAAPVHSSA PASASTAYQP LDVEGLQRPL VQPAPPAQPD
APVINPPSAA PASDQPATSA NQQVSPAIHQ PFQAAKDGVT GKILKFGQKP FRFEPDKPES
TFITLRTVNG VQTFWGKELA GLLRQTRVQP GKMVTLQWLG NHPVTVKVPR KNEQGVTVGY
DDKDVHRNQW ALKVEGNPAV RSGQDEGVKL GAYDAGRFAV VQQAWLAQLG VEAPLPTPPT
DGLYWLTPNG EGSAKTGDEL SAPRPPIDPN NTAGQPVISS WSRDGHLDMY LVRGDGPYLQ
GVVRQGDQMQ HVLVSLPGRD DGPSMVFNAI TPEGLLPIGT GNGINRSGGE PVSREHIAFK
LEGDSAVRIG KLDAPGEVPP TLHNLLGFDQ RWKEENTLPK SAPTAAPSVQ PSDPRPV
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