Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0048 |
Symbol | |
ID | 1187426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 37786 |
End bp | 38058 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637408308 |
Product | putative lipoprotein |
Protein accession | NP_808634 |
Protein GI | 29171588 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAGA GACTCCTTTT TTCCGTGCTG CTCATCTCTC TGTCAGGGTG CAGCCAGCCG ACGGCCCAGT TCGCACAGGA ACCGGCGGGG GAACGGGTGG ATGAGCTGAT CCGACAGAGC GCTTCTTCGG TGAGCCAGGC GCAGAGCCGG TTGCACCAGA CCAGCGCTGT TCCTTCCTTT GCTCCCGTGT CAGCACAGGT CAAACCGACC GCTAAAGCAC AGGCTCCCGC AGTCAAAGCT CCCGTCAGGC CTGTGCCTGT TGCTGGGGGT TAG
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Protein sequence | MQKRLLFSVL LISLSGCSQP TAQFAQEPAG ERVDELIRQS ASSVSQAQSR LHQTSAVPSF APVSAQVKPT AKAQAPAVKA PVRPVPVAGG
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