| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_B0043 |
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| Symbol | |
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| ID | 1187421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004632 |
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| Strand | + |
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| Start bp | 34735 |
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| End bp | 36081 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637408303 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_808629 |
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| Protein GI | 29171583 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.768707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA AAAGTAAACT GATGCCAGAT GAAACTACAG CCGAGCGTAA AATTCGTTTG
CGGAAGGTTG CCGCCGCAAC AATCGTCGGC TCAATGCTGG AGTGGTATGA TTTTTATCTG
TATGCATTGA TGGCTGCCAC TGTTTTTTCT AAAGTTTTCT TTAATCCTGC TGATCCGCAA
AATGCGACAC TACTGTCGTT CTCTACATTC GCAATCGGCT TTATAGCTCG ACCGTTTGGA
GGTATTCTTT TTGGACACCT CGGAGATAAG TTTGGCCGTA AACGAATGTT GATGGTTACC
TTTTGCCTAA TGGGAGTTTG CACAACAATC ATTGGGCTCA TTCCTGGTTA TGCCACGCTC
GGCATTTGGG CACCCATAAC GTTAGTGTTG ATTCGAATCT TGCAAGGTTT AGGCGCTGGT
GCGGAACTCG CTGCAGCCGC TGTCACAGCG TATGAGCATG CTGACGAGAA CAAGCGCGGC
AGCCAGGGCG CATGGCCCGC TCTAGGGTTG AACCTGGGTC TGCTTCTATC GTCGCTGACG
GTCTATCTTC TGACGCTGCA GGGTGAAGCA TTCTTGCTTT CTGGAGGGTG GAGAATTCCA
TTTATAGCCA GTATCGTTCT TGTCATGGTT GGATTGTGGG TGCGCAGAAG CATTCCAGAA
ACGATTGCGT TCCAGAAGAT CAGTGAAGAC AACAAATCAC AGGTCACGTC GAACACAGGG
ATAGAAAAAG CACCTTTGCT GACTTTGCTT AAGAAAGACT TTAAAGGTCT TGTTGTCGTG
CTTCTTGTTG CAATTGGGTA TAATGCATTA AGCTATATAT TCAAAACCTT TTCACTCGCA
TACCTCACAT TGTATAAGGG AGTCTCCGCA AATACCACGT CGCTATCTGT AACCATTGCC
AGTCTAATAG CAATTTTCAC GGTTCCTTGT TTTGGCGCTT TGTGTGATCG CTGGAGCAGC
AAAAAAGTAT TGATGGCTGG AGGGACGCTG TCTGCAATAT TTGCGTACAC CTTCATGCAG
CTCTTGGAGA CAGGGCAGAG CTTGTGGATC TGTGTCGCTA TTGGTTTTGC AACTGGTGTA
CTTGCACCTA TGATGTTCGC TCCACAAGGC TCTTTCTTGA GTCGTCAGTT TCCTGCTAAT
ACAAGGTCAT CGGGCGTTGG TACTGGTCGT GAGATTGGAA CTGCTATAGC GGGTGGCCTA
GCTCCACTTG GAGCGTTATC CTTGGTTTCA AGTTCTCCAA CGCACTCAAC AAATGGCGTT
GTACTGATCT TGGTTTTATC AGCAGTTTTG CTAGTCGTGG CCAGCGCGTT TGATCAAGGT
GGTAAGAGTT CTAGTTTCAA AAACTGA
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| Protein sequence | MSEKSKLMPD ETTAERKIRL RKVAAATIVG SMLEWYDFYL YALMAATVFS KVFFNPADPQ
NATLLSFSTF AIGFIARPFG GILFGHLGDK FGRKRMLMVT FCLMGVCTTI IGLIPGYATL
GIWAPITLVL IRILQGLGAG AELAAAAVTA YEHADENKRG SQGAWPALGL NLGLLLSSLT
VYLLTLQGEA FLLSGGWRIP FIASIVLVMV GLWVRRSIPE TIAFQKISED NKSQVTSNTG
IEKAPLLTLL KKDFKGLVVV LLVAIGYNAL SYIFKTFSLA YLTLYKGVSA NTTSLSVTIA
SLIAIFTVPC FGALCDRWSS KKVLMAGGTL SAIFAYTFMQ LLETGQSLWI CVAIGFATGV
LAPMMFAPQG SFLSRQFPAN TRSSGVGTGR EIGTAIAGGL APLGALSLVS SSPTHSTNGV
VLILVLSAVL LVVASAFDQG GKSSSFKN
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