| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_B0042 |
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| Symbol | |
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| ID | 1187420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004632 |
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| Strand | + |
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| Start bp | 33497 |
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| End bp | 34693 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637408302 |
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| Product | hydroxyglutarate oxidase |
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| Protein accession | NP_808628 |
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| Protein GI | 29171582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.711418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTACG ATTTCTGTGT GATTGGGGGT GGGATAGTGG GGCTGGCCAC AGCCATGCAA
CTGCTTAGGG CGCATCCAGG CGCTTCGTTG GTACTCGTGG AAAAAGAGGC AGCGATAGCA
AAGCACCAAA CTGGCCATAA CAGCGGGGTC ATCCATGCTG GGGTCTACTA CGATCCTGGC
AGTTTGAAGG CCGTACTGTG CAAGCGTGGG GCAGAGCTGA CAAAAGCCTT CTGTACAGAA
CACAAGATCC CGTATGAGGT TTGCGGGAAA ATGCTTGTGG CATCTAATCC TCGACAGCTT
GCCTCGCTCA GCAACCTTGA AGCGCGAGCC AGACAGAATG GGCTCAACGT TGAACGACTT
GAAGCTAGGG CGCTAATGCA ACGCGAACCC AATATCACAG GTCTGGGCGC ACTGTTTGTA
GACAGCAGCG GTATTGTGGA TTATCGCCTC GTATCAGATG TGATGGCTGG TGTGATAGCC
AAAGCCGGTG GGGAAATAGC ATTAGGTCAA ACTATAGTCG CAATTCAGGA GCATGAGAGC
CATGTATCGG TGTCATCAGA AGCGCTATCC TGGAAGGCTA AAAAATTAGT GGTTTGCGCG
GGTTTACAGT CTGATCGTTT AGCTGGAATG GCCGGACTGG ATGTCGATTT TCAGATTATA
CCTTTTCGTG GTGAATATTT TCGCTTACCG TCAGAAAAAA ACAACAGTAT AAATCACCTG
ATCTACCCAG TGCCAGAAGC AGGGCTTCCA TTTCTCGGCA TTCATCTAAC TCGTATGATT
GACGGAGGGG TTACGGTTGG ACCCAATGCT GTGCTTGGTT TTTCTCGCGA GGGTTACAAA
AAACATGCGT TCAATGCTCG CGATGTTTTG GAATACAGCA TGTATCCTGG CTTTTGGAAG
CTTCTTGGTA AAAATTTACG CTCCGGAGTT AGCGAGATTA AAAATTCGGC CTGTAAGAAA
AGCTACTTAG AACAATGCCG TCAATATTAC CCCTCTCTCA GACTTGAAGA CTTACAGCCA
TCGGACGCAG GAATACGCGC GCAGGCGGTC ACAAAAAACG GAGGGTTTGT ACATGACTTT
CTGTTTGTCC AAACCTCTAG AATGCTGCAC GTGTGTAATG CACCATCACC GGCAGCTACG
TCGGCGATTC CCATAGCAGA AATGATAGTG GCAAAACTAG AAGGCTCTGT AGTTTAA
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| Protein sequence | MIYDFCVIGG GIVGLATAMQ LLRAHPGASL VLVEKEAAIA KHQTGHNSGV IHAGVYYDPG
SLKAVLCKRG AELTKAFCTE HKIPYEVCGK MLVASNPRQL ASLSNLEARA RQNGLNVERL
EARALMQREP NITGLGALFV DSSGIVDYRL VSDVMAGVIA KAGGEIALGQ TIVAIQEHES
HVSVSSEALS WKAKKLVVCA GLQSDRLAGM AGLDVDFQII PFRGEYFRLP SEKNNSINHL
IYPVPEAGLP FLGIHLTRMI DGGVTVGPNA VLGFSREGYK KHAFNARDVL EYSMYPGFWK
LLGKNLRSGV SEIKNSACKK SYLEQCRQYY PSLRLEDLQP SDAGIRAQAV TKNGGFVHDF
LFVQTSRMLH VCNAPSPAAT SAIPIAEMIV AKLEGSVV
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