Gene PSPTO_B0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0030 
Symbol 
ID1187408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp25779 
End bp26615 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID637408292 
Producthypothetical protein 
Protein accessionNP_808618 
Protein GI29171572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0366118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATGT CCAGCAACTT CCGTAACCCA TGCATGATCC GCAGTGACGT CCCACTGAGC 
AACGATCAGA TCGCCCACTA TGTGCCTTCC ATCTTCGCCG AAGAAGCGCA CGACAGCAGG
TCGGCACGTT ATCTGTATAT CCCGACCGTG CAGGTACTTG ATGCGCTGCG CGCCGAAGGA
TTTGAACCAT TCATGGCCTG TCAGACACGC GTGCGTGACC AGGGCAAACG TGAGCACACC
AAGCACATGC TGCGCCTGCG CCATGCGAGC CAGATCCTGG ACCAGGAAGC CAACGAAGTC
ATCCTGCTCA ACAGCCACGA TGGCAGCAGC AGCTATCAGA TGATTGGAGG CAAATTCCGT
TTCGTGTGTG CAAACGGACT GGTACTGGGG GACGTTGCTG CTGACCAGAA AGTGCGCCAT
AGCGGCCGTG GTGATGTGGT GCATGACGTG ATCGAAGGCG CCTTCGAAGT GTTGAAGCAT
TTCGAACAGA TCGACCACAT CACCGCTGAC ATGAAGCATC AACAATTAGA CCAGGACGAG
CAAGAGGCCT TTGCATTGGC TGCCTTGGCG TATCGCTACG ATCCGGCAGA AGGACCTGCG
CCTGTTACCC CGTCCCAGTT GCTCATGCCA CGCCGTCGGG AGGACCGTAG CAGCGACCTT
TGGACCACCT TCAATCGAGT CCAGGAAAAC ACCATCAAAG GCGGTTTGAC CGGGCGTAAC
AAGCAAGGCC GACGCACGAC CACGCGAGCG GTCAATGGGA TTGATCAGGA CGTGAAACTG
AACCGGGCCT TGTGGGTGCT TGCGCAGGCT ATGGGTGAGC ACAGAAAAGC CGCTTAA
 
Protein sequence
MRMSSNFRNP CMIRSDVPLS NDQIAHYVPS IFAEEAHDSR SARYLYIPTV QVLDALRAEG 
FEPFMACQTR VRDQGKREHT KHMLRLRHAS QILDQEANEV ILLNSHDGSS SYQMIGGKFR
FVCANGLVLG DVAADQKVRH SGRGDVVHDV IEGAFEVLKH FEQIDHITAD MKHQQLDQDE
QEAFALAALA YRYDPAEGPA PVTPSQLLMP RRREDRSSDL WTTFNRVQEN TIKGGLTGRN
KQGRRTTTRA VNGIDQDVKL NRALWVLAQA MGEHRKAA