Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0030 |
Symbol | |
ID | 1187408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 25779 |
End bp | 26615 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637408292 |
Product | hypothetical protein |
Protein accession | NP_808618 |
Protein GI | 29171572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.0366118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTATGT CCAGCAACTT CCGTAACCCA TGCATGATCC GCAGTGACGT CCCACTGAGC AACGATCAGA TCGCCCACTA TGTGCCTTCC ATCTTCGCCG AAGAAGCGCA CGACAGCAGG TCGGCACGTT ATCTGTATAT CCCGACCGTG CAGGTACTTG ATGCGCTGCG CGCCGAAGGA TTTGAACCAT TCATGGCCTG TCAGACACGC GTGCGTGACC AGGGCAAACG TGAGCACACC AAGCACATGC TGCGCCTGCG CCATGCGAGC CAGATCCTGG ACCAGGAAGC CAACGAAGTC ATCCTGCTCA ACAGCCACGA TGGCAGCAGC AGCTATCAGA TGATTGGAGG CAAATTCCGT TTCGTGTGTG CAAACGGACT GGTACTGGGG GACGTTGCTG CTGACCAGAA AGTGCGCCAT AGCGGCCGTG GTGATGTGGT GCATGACGTG ATCGAAGGCG CCTTCGAAGT GTTGAAGCAT TTCGAACAGA TCGACCACAT CACCGCTGAC ATGAAGCATC AACAATTAGA CCAGGACGAG CAAGAGGCCT TTGCATTGGC TGCCTTGGCG TATCGCTACG ATCCGGCAGA AGGACCTGCG CCTGTTACCC CGTCCCAGTT GCTCATGCCA CGCCGTCGGG AGGACCGTAG CAGCGACCTT TGGACCACCT TCAATCGAGT CCAGGAAAAC ACCATCAAAG GCGGTTTGAC CGGGCGTAAC AAGCAAGGCC GACGCACGAC CACGCGAGCG GTCAATGGGA TTGATCAGGA CGTGAAACTG AACCGGGCCT TGTGGGTGCT TGCGCAGGCT ATGGGTGAGC ACAGAAAAGC CGCTTAA
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Protein sequence | MRMSSNFRNP CMIRSDVPLS NDQIAHYVPS IFAEEAHDSR SARYLYIPTV QVLDALRAEG FEPFMACQTR VRDQGKREHT KHMLRLRHAS QILDQEANEV ILLNSHDGSS SYQMIGGKFR FVCANGLVLG DVAADQKVRH SGRGDVVHDV IEGAFEVLKH FEQIDHITAD MKHQQLDQDE QEAFALAALA YRYDPAEGPA PVTPSQLLMP RRREDRSSDL WTTFNRVQEN TIKGGLTGRN KQGRRTTTRA VNGIDQDVKL NRALWVLAQA MGEHRKAA
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