Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0025 |
Symbol | |
ID | 1187403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | + |
Start bp | 23792 |
End bp | 24130 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637408287 |
Product | hypothetical protein |
Protein accession | NP_808613 |
Protein GI | 29171567 |
COG category | [S] Function unknown |
COG ID | [COG4679] Phage-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0000520365 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAG TCCTCAAACA AATCATCTTT ATGGGCTCAG CTCTAAACGA CCTGAGAGCG TTCCCAATCT CTGCCCGCCG TGAGGCCGGC TTTCAGCTGG ATAGGGTGCA GGTGGGCAAT GAGCCTGACG ATTGGAAGCC CATGACGACC GTTGGTCCAG GGGTACAGGA GATACGGATC AGGGACGCCC ACGGCGCCTT CCGTGTGATC TACATTGCGA AATTCTCGAC GGCGGTTTAT GTCCTGCACT GCTTCCAAAA GAAGACGCAA AAAACGAGCA AGCATGACCT TGACCTCGCC GCCAAGCGGA TGAAAGAACT GACTAAGGAG TTGAACTAA
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Protein sequence | MNKVLKQIIF MGSALNDLRA FPISARREAG FQLDRVQVGN EPDDWKPMTT VGPGVQEIRI RDAHGAFRVI YIAKFSTAVY VLHCFQKKTQ KTSKHDLDLA AKRMKELTKE LN
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