Gene PSPTO_B0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0025 
Symbol 
ID1187403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp23792 
End bp24130 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content53% 
IMG OID637408287 
Producthypothetical protein 
Protein accessionNP_808613 
Protein GI29171567 
COG category[S] Function unknown 
COG ID[COG4679] Phage-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0000520365 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG TCCTCAAACA AATCATCTTT ATGGGCTCAG CTCTAAACGA CCTGAGAGCG 
TTCCCAATCT CTGCCCGCCG TGAGGCCGGC TTTCAGCTGG ATAGGGTGCA GGTGGGCAAT
GAGCCTGACG ATTGGAAGCC CATGACGACC GTTGGTCCAG GGGTACAGGA GATACGGATC
AGGGACGCCC ACGGCGCCTT CCGTGTGATC TACATTGCGA AATTCTCGAC GGCGGTTTAT
GTCCTGCACT GCTTCCAAAA GAAGACGCAA AAAACGAGCA AGCATGACCT TGACCTCGCC
GCCAAGCGGA TGAAAGAACT GACTAAGGAG TTGAACTAA
 
Protein sequence
MNKVLKQIIF MGSALNDLRA FPISARREAG FQLDRVQVGN EPDDWKPMTT VGPGVQEIRI 
RDAHGAFRVI YIAKFSTAVY VLHCFQKKTQ KTSKHDLDLA AKRMKELTKE LN