Gene PSPTO_B0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0024 
Symbol 
ID1187402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand- 
Start bp22964 
End bp23584 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID637408286 
Productresolvase, putative 
Protein accessionNP_808612 
Protein GI29171566 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.000663819 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCATTC GTGCATACCT TCGAGCATCG ACCGATGACC AGGACGCAAG TCGAGCGCGC 
GATTATTTGG AAACGTTTGT CTCCGGCTAC GGCAAGGCCA TCGCATCGTG CTACATGGAA 
AATGCCAGTG GCAGCCATGC CGACCGCCCG GAATTAATCC GACTACTCAA AGATGCTCGC 
CGAGGTGACG TGCTGCTGGT GGAAAGCATC GATCGGCTGT CGCGGATGGA TGACCAGGCT 
TGGCGATCCC TCAAAACAGC AATCGATAAC CGAGGCATAC GGATCGTCTC TGTGGATCTG 
CCTACCAGTC ATCAAGGCAT GACGGCCCAG TCGGGGGACG AGTTCACCGA CCGCATGCTG 
GCGGCCATCA ACTACATGAT GATCGATATG ATGGCCGCGA TTGCCAGGAA GGACTATCAG 
CAAAGAAGAC TGCGCCAGGC ACAAGGGATT GAGAAGGCAA GAGCTTCAGG CGTCTACAAA 
GGCAGACCCG TAGACGCAGA ACTGCGTAAC CGAGTGCGTG AGCTGCTGGC TGCGGGTCTC 
GGAATCCGCG CCGTAGCGAG GCATGCTGCG TGTTCAACTA CGACCGTCAT GAAGGTCCGC 
GACGAGCTGG CGCAACGTTA G
 
Protein sequence
MFIRAYLRAS TDDQDASRAR DYLETFVSGY GKAIASCYME NASGSHADRP ELIRLLKDAR 
RGDVLLVESI DRLSRMDDQA WRSLKTAIDN RGIRIVSVDL PTSHQGMTAQ SGDEFTDRML 
AAINYMMIDM MAAIARKDYQ QRRLRQAQGI EKARASGVYK GRPVDAELRN RVRELLAAGL 
GIRAVARHAA CSTTTVMKVR DELAQR