Gene PSPTO_B0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0021 
Symbol 
ID1187399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp21094 
End bp21777 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content52% 
IMG OID637408283 
Producthypothetical protein 
Protein accessionNP_808609 
Protein GI29171563 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.0145504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTT ATGCTGTGGC AAATACGAAA GGTGGCGTAG GTAAGACCAC TACTGCAGTC 
AGCTTGGGAA TCGGTTTGAC GCTCAAAGGG CGCAAGGTGT GGGTAATTGA TGGCGACCGT
CAGAAGACTG CGCAGAAAGC CATCACACAC CGGTATACCA AAGGGATCGA GCCTGCCTTG
GCATGCGACG CTTATATTGA TGGTCCAACG CTGCGCAGCC AGCTGATGCT GCGCAAGGGC
GACTATGACG ATATCGTGAT CGACGTGGGT GGCTTCGATT CTTCTGCTAT GCGTGCGGCA
TTGGTTTTAT GCGATGCAGT GATCATACCG TTCCGTCCTC GCTCGTTTGA CATGTGGGCC
TTTGACGAGA TGTTGCCTCT GCTGGAAGAC GCGCGTAGCA CTCGCGACGA CTTCCCCGCC
TATGCGGTCC TCTGCCAGGC AGACCCTGGC GTTCTGGCAC TCGACAATAT TGAAGCGGCT
AAATGGGTTT CGGAGTACCC ACAACTTACT TACGTGGATA CCCCGCTCCG TACACGTAAG
GCTGTTAGCA ATGCCACAGG CCAAGGCATG GGGGTATGGG AGTACAGCCC CAAAGATGGT
AAAGCAATCG CCGAAATCGA TGCTTTAATT AAATATCTAA TACATATGCA TTGCGGATCA
AAACCGAATG AGGATGCAGC GTAA
 
Protein sequence
MTIYAVANTK GGVGKTTTAV SLGIGLTLKG RKVWVIDGDR QKTAQKAITH RYTKGIEPAL 
ACDAYIDGPT LRSQLMLRKG DYDDIVIDVG GFDSSAMRAA LVLCDAVIIP FRPRSFDMWA
FDEMLPLLED ARSTRDDFPA YAVLCQADPG VLALDNIEAA KWVSEYPQLT YVDTPLRTRK
AVSNATGQGM GVWEYSPKDG KAIAEIDALI KYLIHMHCGS KPNEDAA