Gene PSPTO_B0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_B0016 
Symbol 
ID1187394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004632 
Strand
Start bp16446 
End bp16799 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content57% 
IMG OID637408279 
Producthypothetical protein 
Protein accessionNP_808605 
Protein GI29171559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.257099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAACA AAGCACCTAA ACAGTCGCTC GCTCTCGGCA GACGCCGCAG GGCACTAGAT 
CACGATTCAC AAGCGCGCCG GGTTTCCGCG CTGCTTGCCC TTTACGGCAA AAACAGCCCA
CCCCCGATTC TGCAAGTGAT CGCTGCTGAC GGAATAAACG CCATCACCAG CGCTGCTTCT
CAGGATGCAG CCTGCAAGGC ATACAGTAGA ACGATGATCG GAGTGAGAGT GCAGATCGCC
GCCGACTGCC TCGATCCTCG TGAGGAAGCG CTGTTGGAGG CATCGCTTAG CTGTAACGAC
CTGCAATCGA AATGGCACCG ACCTGCAATC ATCGCGTTTT TCGACCGGGA TTGA
 
Protein sequence
MPNKAPKQSL ALGRRRRALD HDSQARRVSA LLALYGKNSP PPILQVIAAD GINAITSAAS 
QDAACKAYSR TMIGVRVQIA ADCLDPREEA LLEASLSCND LQSKWHRPAI IAFFDRD