Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_B0002 |
Symbol | |
ID | 1187380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004632 |
Strand | - |
Start bp | 1841 |
End bp | 3070 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637408268 |
Product | ISPsy3, transposase |
Protein accession | NP_808594 |
Protein GI | 29171548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCTG CTTACCCACC GCTGCTGCTT CAGATGAGTC CTGCCTACAC GCCTCGACCG CTCAAAAACC TCTTCACCGC TAACCAGTGC TGGGCACACC TCATCGAGGA GGGCGGCTTA CGCGACATCG AAGTCGAGTC CGTCACCAAA ATGCTGGCCT GCGGCACCTC GATCCTGGGC GTCAAACACT ACACCTGCGG CAACCACAGC TGCCCGCACG TCAAATACCT GTGCAACACC TGCAGTTGCC GCGCCTGTCC ATCCTGCGGC AAAAAGGCTA CCGATCAGTG GATAGCCAAT CAACAGCACC GCTTACCCGA GTGTACCTGG CAACACCTGG TGTTCACATT GCCTGACACC CTGTGGCCGC TGTTCTTTCA TAACCGTCAC TGGCTCGATG CCTTGTGTCG CCTGGCCGTC GACAACCTGC TCTATGCGGG CCGACGCCGG GGCGTGGAGG TGGGTGTTTT CTGCGCCATC CACACCTACG GGCGGCGACT TAACTGGCAC CCACACATCC ATGTCTCGGT CACCTTGGGT GGGATCGATG ACGCAGGTGT CTGGAAAGAT CTTTCGTTTC ATCCATCAGC CTTGCGTCGA CGCTGGATGT GGAATGTACG CCAGTACCTG CTCAGTCAGT GGGAGCACAC CACCGTCCCA CCTGAAAACG CTCATCTGCA GAGCGAAAAT GACTGGCGTC ACCTCGTGCT CAACGCCGGT GGTCAGCACT GGCACATCCA CTTGTCGAAG AAGACGAAAA ACGGCAAAAA GACCGTCAAT TACCTGGGCC GCTACCTGAA AAAACCGCCC ATCTCGGGCA GTCGTCTGGC GCACTACACC TCCGGTGCCA CGTTGAGCTT CACCTACCTG GATCACCGCA CCAAGACCTA TCAACAGGAA ACACTGAGCC AGACCGACAT GCTGCGCCGG GTGGTGCAGC ACATCCCGGA GAAGCACTTT CGGATGATCC GGTATTTTGG ATTTCTGGCC AACCGCGTCT GTGGCCGACA GCTACCCCGG GTGTATGAGG CGATACGAAT GGAAAGGCGT GGCAAAGCGC CAAAACTGTA TTTTGCGCAG ATGAGCAAAG CGTTCTTGCA TCGGGATCCG TTCAGCTGCG TGCTGTGCGG AGCGCGGATG GTGTACACCG CAGCCATCGC CGGTCTGACA GTGCAGGGCT TGATCAACAA CGCTCAAAGC ATCGCGCAAT TGAGGTACGT GCCGGCCTGA
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Protein sequence | MKPAYPPLLL QMSPAYTPRP LKNLFTANQC WAHLIEEGGL RDIEVESVTK MLACGTSILG VKHYTCGNHS CPHVKYLCNT CSCRACPSCG KKATDQWIAN QQHRLPECTW QHLVFTLPDT LWPLFFHNRH WLDALCRLAV DNLLYAGRRR GVEVGVFCAI HTYGRRLNWH PHIHVSVTLG GIDDAGVWKD LSFHPSALRR RWMWNVRQYL LSQWEHTTVP PENAHLQSEN DWRHLVLNAG GQHWHIHLSK KTKNGKKTVN YLGRYLKKPP ISGSRLAHYT SGATLSFTYL DHRTKTYQQE TLSQTDMLRR VVQHIPEKHF RMIRYFGFLA NRVCGRQLPR VYEAIRMERR GKAPKLYFAQ MSKAFLHRDP FSCVLCGARM VYTAAIAGLT VQGLINNAQS IAQLRYVPA
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