| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_B0001 |
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| Symbol | |
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| ID | 1187379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004632 |
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| Strand | + |
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| Start bp | 350 |
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| End bp | 1723 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637408267 |
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| Product | RepA protein, putative |
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| Protein accession | NP_808593 |
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| Protein GI | 29171547 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.93501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCACG ACCACGCGAT CAGTCTTGCC CGCGCGACCT CACCCACGGC CAACGCCGAT
CCGCTGGCCA GCAGCACCCA CCTGCCGCCT GCCCGTTTCT TCGAAGACGG CACTGCGCTC
AACCGGTTAT TGCTGGAAGC GCCGTACATG GCGCGGTGCA GTGACGACAA AACCGCGACT
CGCGTCCGTC CTCGTGAATA CGCGCTGCGT TATCCCTATA TGCAGGTCAA TCGCCCCGGC
ATGGTGTCTT GGCTGGTGTT CGACCTGGAC CATGCCAACG CATTAGCCTG GGACGATGCT
GGGTTGCCCG CGCCTAACCT GATGGTGCGC AACCGCAAGA GCGGTCACTC CCAGCTGTTC
TATGCGGTGC CGTCCGTATG CACCACTGAG AATGCACGGA CCAAGCCCAT TCAGTACATG
AAAGCGATCT ATGCCGCGTT TGCCGCTCGC CTCGACGCGG ACGTGGACTA CCACGGTGGC
CCTGTGGCCA AAACACCTGG CCACCCTTGG TGGGAGACGA CCGAATTTCA TAGCCACGTG
TACGAACTGG GCGAACTGGC GAGCGCGGTG GAGTTGACCG TCAAACCCTG GGCCACAGGT
CCCAAGCTTG ACCAGGTCAG CCATTCGCGG CACTGCATCC TGTTCGAGCA GCTGCGTTAT
TTTGCGTACA GCATCGTCAA TCGCGAGCGC GAGCTGGGTT CGTTTGAGTC CTTCATGCGC
TCGCTCGATG CATATGCCTA CAACCACAAC AGCTTTCTAA AGCAGGGGTT TTCGGAAAAC
CTGCCGCTGT CATCGATACG TGCCACGGTC AAATCCGTAG GTCGCTGGAC GTGGGATCGG
TACACCGGTG ATCGTCGCTG CCATCGAGGC GCAATGCAGC TCGATGGCAG CTTGTCGCTC
ACCGAACGGC AGAGCCTGGC GGCCAAGCGC ACCAATGAGC TGCGGCACAA AGCCACAGAA
TCGAAGATCC GAGCAGCGTG CAGGCAGCTT CAAGACCAGG GCAAGGCACT GGTACGTTCT
GCCATTGCGA AACTCGCCGG CGTTTCGGTG AGAACGGTGG CCAGCTACAC GCACATTCTC
ACTGAAGTCT CTCAACCATC CACTGTGAGT GTTCTCAGGG CTACCCGTCA GCCTGCCAAG
GTTGCGACTG GGGCAGATGG CCCAGTCGAT TCAACTACCC CACAACCCGC TTCGGGCCAG
GCTGCAAATC GTCGCGCTCC AGGTGTGCAA TCCGGTGTAC ATCAGATATC TGCGGTGCCG
AAGGGGCCGC AAGCTGGAGA GCCGTTAAAA AAGGAACATG ACGATTGTTC ATGTATAGGA
ATTTCAATAA TTCCTATACA GGGTAATCCT CCTAAAAAGG CACCCTCTGC GTGA
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| Protein sequence | MSHDHAISLA RATSPTANAD PLASSTHLPP ARFFEDGTAL NRLLLEAPYM ARCSDDKTAT
RVRPREYALR YPYMQVNRPG MVSWLVFDLD HANALAWDDA GLPAPNLMVR NRKSGHSQLF
YAVPSVCTTE NARTKPIQYM KAIYAAFAAR LDADVDYHGG PVAKTPGHPW WETTEFHSHV
YELGELASAV ELTVKPWATG PKLDQVSHSR HCILFEQLRY FAYSIVNRER ELGSFESFMR
SLDAYAYNHN SFLKQGFSEN LPLSSIRATV KSVGRWTWDR YTGDRRCHRG AMQLDGSLSL
TERQSLAAKR TNELRHKATE SKIRAACRQL QDQGKALVRS AIAKLAGVSV RTVASYTHIL
TEVSQPSTVS VLRATRQPAK VATGADGPVD STTPQPASGQ AANRRAPGVQ SGVHQISAVP
KGPQAGEPLK KEHDDCSCIG ISIIPIQGNP PKKAPSA
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