| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_r12 |
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| Symbol | ps16SD |
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| ID | 1185099 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3873151 |
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| End bp | 3874668 |
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| Gene Length | 1518 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640701170 |
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| Product | 16S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.103898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GATCATGGCT CAGATTGAAC GCTGGCGGCA GGCCTAACAC ATGCAAGTCG AGCGGCAGCA
CGGGTACTTG TACCTGGTGG CGAGCGGCGG ACGGGTGAGT AATGCCTAGG AATCTGCCTG
GTAGTGGGGG ATAACGCTCG GAAACGGACG CTAATACCGC ATACGTCCTA CGGGAGAAAG
CAGGGGACCT TCGGGCCTTG CGCTATCAGA TGAGCCTAGG TCGGATTAGC TAGTTGGTGA
GGTAATGGCT CACCAAGGCG ACGATCCGTA ACTGGTCTGA GAGGATGATC AGTCACACTG
GAACTGAGAC ACGGTCCAGA CTCCTACGGG AGGCAGCAGT GGGGAATATT GGACAATGGG
CGAAAGCCTG ATCCAGCCAT GCCGCGTGTG TGAAGAAGGT CTTCGGATTG TAAAGCACTT
TAAGTTGGGA GGAAGGGCAG TTACCTAATA CGTATCTGTT TTGACGTTAC CGACAGAATA
AGCACCGGCT AACTCTGTGC CAGCAGCCGC GGTAATACAG AGGGTGCAAG CGTTAATCGG
AATTACTGGG CGTAAAGCGC GCGTAGGTGG TTTGTTAAGT TGAATGTGAA ATCCCCGGGC
TCAACCTGGG AACTGCATCC AAAACTGGCA AGCTAGAGTA TGGTAGAGGG TGGTGGAATT
TCCTGTGTAG CGGTGAAATG CGTAGATATA GGAAGGAACA CCAGTGGCGA AGGCGACCAC
CTGGACTGAT ACTGACACTG AGGTGCGAAA GCGTGGGGAG CAAACAGGAT TAGATACCCT
GGTAGTCCAC GCCGTAAACG ATGTCAACTA GCCGTTGGGA GCCTTGAGCT CTTAGTGGCG
CAGCTAACGC ATTAAGTTGA CCGCCTGGGG AGTACGGCCG CAAGGTTAAA ACTCAAATGA
ATTGACGGGG GCCCGCACAA GCGGTGGAGC ATGTGGTTTA ATTCGAAGCA ACGCGAAGAA
CCTTACCAGG CCTTGACATC CAATGAATCC TTTAGAGATA GAGGAGTGCC TTCGGGAGCA
TTGAGACAGG TGCTGCATGG CTGTCGTCAG CTCGTGTCGT GAGATGTTGG GTTAAGTCCC
GTAACGAGCG CAACCCTTGT CCTTAGTTAC CAGCACGTTA AGGTGGGCAC TCTAAGGAGA
CTGCCGGTGA CAAACCGGAG GAAGGTGGGG ATGACGTCAA GTCATCATGG CCCTTACGGC
CTGGGCTACA CACGTGCTAC AATGGTCGGT ACAGAGGGTT GCCAAGCCGC GAGGTGGAGC
TAATCTCACA AAACCGATCG TAGTCCGGAT CGCAGTCTGC AACTCGACTG CGTGAAGTCG
GAATCGCTAG TAATCGCGAA TCAGAATGTC GCGGTGAATA CGTTCCCGGG CCTTGTACAC
ACCGCCCGTC ACACCATGGG AGTGGGTTGC ACCAGAAGTA GCTAGTCTAA CCTTCGGGGG
GACGGTTACC ACGGTGTGAT TCATGACTGG GGTGAAGTCG TAACAAGGTA GCCGTAGGGG
AACCTGCGGC TGGATCAC
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| Protein sequence | |
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