Gene PSPTO_5629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5629 
Symbol 
ID5666586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp5328266 
End bp5329000 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content57% 
IMG OID 
Productinsertion sequence, putative 
Protein accessionYP_001504341 
Protein GI158146060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGC TTTACGAACT CTCCGACGCA TCGTGGGAAT TGATCAAGGA TCTGGTTTCT 
CCCGAGCAGA AAATGGGTCG CCCACGTAGC GATGATCGTC TGGTACTCCA CGGAATCCTT 
TGGATTTTGT GCTCAGGTGC TGCCTGGCGT GATCTGCCGG AACGCTTTGG GCCTTGGTCG 
GCGGTGTATC AGCGTTTTCG TGACTGGCGC GATAACTGCA CGTTCGACCG GAAGCTGGAA 
CGCTTGCACA TTCGACTCAA CCATGAAGGA CTGATTGATC TGGACACCTG GATGATCGAC 
TCCACGGCGG TACGTGCAAC CCGAGCCTCT TCAGACGCCG GGAAAAGGGG GCCTGAAGAA 
CCGCTAGACC ATGCTCTGGG GCGAAGTCGA GGCGGCCTGA CAACCAGGAT TCATATGGTT 
TGCGACGCTA ATGGCTTGCC ATTGCGCTTC ATGCTCTCAC CGGGACAGGC TAGCGATATC 
GCCCACGCCC GGCCGTTACT GGATCAGGTG CGCATTCTCG GTAAGCCGGG GCGACCGCGA 
AAGCGCAGTA GATGGTTACT GGCTGACAAC GGCTATGACG CAGAACACCT GCGTTACTAC 
TGCGACCGTT ATCGAATGCA GCCTGTGATC CCGCTACGCG CCATGCCACG CAAACCCGGC 
CTGGCTTGCC CAGACTCTTT GATCGTCCAA AGTATCGGGA GCGCAACATC ATTGAGCGGA 
TGTTTGGCTG GCTAA
 
Protein sequence
MATLYELSDA SWELIKDLVS PEQKMGRPRS DDRLVLHGIL WILCSGAAWR DLPERFGPWS 
AVYQRFRDWR DNCTFDRKLE RLHIRLNHEG LIDLDTWMID STAVRATRAS SDAGKRGPEE 
PLDHALGRSR GGLTTRIHMV CDANGLPLRF MLSPGQASDI AHARPLLDQV RILGKPGRPR 
KRSRWLLADN GYDAEHLRYY CDRYRMQPVI PLRAMPRKPG LACPDSLIVQ SIGSATSLSG 
CLAG