| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5604 |
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| Symbol | atpE |
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| ID | 1187296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6386310 |
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| End bp | 6386567 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396917 |
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| Product | ATP synthase F0, C subunit |
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| Protein accession | NP_795322 |
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| Protein GI | 28872703 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
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| TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACTG TAGTTGGTCT AACCGCTATC GCTGTTGCAC TGTTGATCGG CCTGGGCGCA
CTGGGTACTG CAATCGGTTT CGGCCTGTTG GGCGGCAAGT TCCTGGAAGG CGCTGCGCGT
CAACCGGAAA TGGTCCCAAT GCTGCAAGTC AAAATGTTCA TCGTTGCGGG CCTGCTCGAC
GCCGTGACCA TGATCGGTGT CGGTATCGCT CTGTTCTTCA CCTTTGCGAA CCCCTTCGTT
GGTCAACTCG CTGGCTGA
|
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| Protein sequence | METVVGLTAI AVALLIGLGA LGTAIGFGLL GGKFLEGAAR QPEMVPMLQV KMFIVAGLLD
AVTMIGVGIA LFFTFANPFV GQLAG
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