Gene PSPTO_5603 details

Gene Information

• Locus tag: PSPTO_5603
• Symbol: atpF
• ID: 1187295
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 6385782
• End bp: 6386252
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637396916
• Product: ATP synthase F0, B subunit
• Protein accession: NP_795321
• Protein GI: 28872702
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACATTA ATGCAACCCT GATTGGTCAG TCCGTTGCGT TCTTCATCTT TGTGCTGTTC 
TGCATGAAGT ACGTGTGGCC TCCGGTCATC GCTGCTTTGC ACGAACGTCA GAAGAAGATC 
GCGGATGGAC TGGACGCTGC TTCCCGAGCA GCTCGCGACC TGGAGCTGGC CCAAGATAAA 
GTGGGTCAAC AACTGCGCGA AGCTAAGGCT CAAGCAGCCG AGATCATTGA GCAAGCCAAG 
AAGCGCGGAA CTCAGATTGT CGACGAGGCC CGTGAAACGG CACGCGTTGA AGCTGACCGT 
GTGAAGGCTC AGGCTCAGGC CGAGATCGAG CAGGAACTGA ACGGTGTCAA AGACGCCTTG 
CGCGCCCAGT TGGGTAGCCT GGCAGTCAAT GGCGCAGAGA AGATTCTGGG CGCCACAATC 
GATCAAAACG CGCACGCGGA GCTGGTTAAC AAACTGGCTG CTGAAATTTA A 

 

Protein sequence

MNINATLIGQ SVAFFIFVLF CMKYVWPPVI AALHERQKKI ADGLDAASRA ARDLELAQDK 
VGQQLREAKA QAAEIIEQAK KRGTQIVDEA RETARVEADR VKAQAQAEIE QELNGVKDAL 
RAQLGSLAVN GAEKILGATI DQNAHAELVN KLAAEI