Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5602 |
Symbol | atpH |
ID | 1187294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 6385233 |
End bp | 6385769 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637396915 |
Product | ATP synthase F1, delta subunit |
Protein accession | NP_795320 |
Protein GI | 28872701 |
COG category | [C] Energy production and conversion |
COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAC TGACCACGTT GGCCCGACCT TACGCGAAGG CGGCCTTCGA GCATGCGCAG GCCCACCAGC AACTGGCCAA TTGGTCAGCC ATGCTCGGCC TGGCTGCTGC AGTGTCGCAA GACGACACCA TGCAGCGCAT GCTCAAGGCC CCGCGAGTGA CGAGCGCACA AAAGGCCACC ACTTTTATTG AAGTGTGTGG CGAAAAGTTC GATGCCAAGG CACAGAATTT CATTCACGTC GTTGCTGAAA ACGACCGTCT CCCGCTTCTG CCGGAGATCG CCGAACTGTT CGACCTGTAC AAGGCCGAGC AGGAAAAATC GGTCGATGTG GATGTCACCA GTGCTTTTGC ATTGAACCAA GAACAGCAAG ACAAACTCGC CAAGGTTCTC AGTGCACGGC TCGGCCGGGA AGTGCGCCTG CATGCTGCGG AGGATGCCTC TCTTATAGGG GGTGTCGTAA TCCGCGCCGG CGACCTGGTT ATCGATGGCT CAGTTCGCGG CAAAATCGCG AAACTAGCCG AAGCATTGAA ATCTTGA
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Protein sequence | MAELTTLARP YAKAAFEHAQ AHQQLANWSA MLGLAAAVSQ DDTMQRMLKA PRVTSAQKAT TFIEVCGEKF DAKAQNFIHV VAENDRLPLL PEIAELFDLY KAEQEKSVDV DVTSAFALNQ EQQDKLAKVL SARLGREVRL HAAEDASLIG GVVIRAGDLV IDGSVRGKIA KLAEALKS
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