Gene PSPTO_5602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5602 
SymbolatpH 
ID1187294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6385233 
End bp6385769 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID637396915 
ProductATP synthase F1, delta subunit 
Protein accessionNP_795320 
Protein GI28872701 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAC TGACCACGTT GGCCCGACCT TACGCGAAGG CGGCCTTCGA GCATGCGCAG 
GCCCACCAGC AACTGGCCAA TTGGTCAGCC ATGCTCGGCC TGGCTGCTGC AGTGTCGCAA
GACGACACCA TGCAGCGCAT GCTCAAGGCC CCGCGAGTGA CGAGCGCACA AAAGGCCACC
ACTTTTATTG AAGTGTGTGG CGAAAAGTTC GATGCCAAGG CACAGAATTT CATTCACGTC
GTTGCTGAAA ACGACCGTCT CCCGCTTCTG CCGGAGATCG CCGAACTGTT CGACCTGTAC
AAGGCCGAGC AGGAAAAATC GGTCGATGTG GATGTCACCA GTGCTTTTGC ATTGAACCAA
GAACAGCAAG ACAAACTCGC CAAGGTTCTC AGTGCACGGC TCGGCCGGGA AGTGCGCCTG
CATGCTGCGG AGGATGCCTC TCTTATAGGG GGTGTCGTAA TCCGCGCCGG CGACCTGGTT
ATCGATGGCT CAGTTCGCGG CAAAATCGCG AAACTAGCCG AAGCATTGAA ATCTTGA
 
Protein sequence
MAELTTLARP YAKAAFEHAQ AHQQLANWSA MLGLAAAVSQ DDTMQRMLKA PRVTSAQKAT 
TFIEVCGEKF DAKAQNFIHV VAENDRLPLL PEIAELFDLY KAEQEKSVDV DVTSAFALNQ
EQQDKLAKVL SARLGREVRL HAAEDASLIG GVVIRAGDLV IDGSVRGKIA KLAEALKS