| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5596 |
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| Symbol | |
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| ID | 1187288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6378249 |
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| End bp | 6379016 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396909 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | NP_795314 |
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| Protein GI | 28872695 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGC GCAATACACC ACAACGCCGC CACAACATCC TTGCCTTGCT TAACGAGCAG
GGTGAAGTGA GTGTCGATGA TCTGGCTAGG CGCTTTGAAA CTTCCGAAGT TACGATCCGA
AAGGATCTGG CGGCACTGGA AACCAACGGC CTGCTATTAC GCCGCTATGG TGGTGCGATT
CCTTTGCCCC ACGAGTTGAT CAGTGAAAGC AGTCAGCCGG TGTCCCGCTA TAAAAAGGCC
ATCGCTCGCG CTGCCGTTTC AAGGATTCGT GAGCACGCCA GGATCATCGT CGACAGCGGC
AGCACTACTG CTGCGTTGAT TCCTGAACTG GGCCAGCAAC CCGGCCTGGT GGTCATGACC
AACTCCCTGC ACGTCGCCCG CGCACTCACC GACCTGGAGC ACGAGCCAGT ACTGTTGATG
ACCGGTGGGA CGTGGGACCC GCATTCCGAG TCGTTTCAGG GCCAAGTCGC CGAGCAGGTA
CTGCGCTCCT ACGATTTCGA TCAGTTGTTC ATCGGTGCCG ACGGCATCGA TCTGATTCGT
GGCACCACCA CGTTCAATGA GCTGCTGGGC TTGAGCCGGG TCATGGCTGA AGTCGCCCGG
GAAGTCGTGG TCATGGTCGA AGCCGACAAG GTAGGCCGCA AGATCCCCAA TCTGGAACTG
CCCTGGAGCA GTATCCATAC CCTTATTACT GATGATCGCC TGCCCGTTGA AGCGCGCGAT
CAGATACAGG CCCGTGGCAT CAATCTCATT TGTGCCGCTG TCAGTTAG
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| Protein sequence | MTKRNTPQRR HNILALLNEQ GEVSVDDLAR RFETSEVTIR KDLAALETNG LLLRRYGGAI
PLPHELISES SQPVSRYKKA IARAAVSRIR EHARIIVDSG STTAALIPEL GQQPGLVVMT
NSLHVARALT DLEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLIR
GTTTFNELLG LSRVMAEVAR EVVVMVEADK VGRKIPNLEL PWSSIHTLIT DDRLPVEARD
QIQARGINLI CAAVS
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