| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5595 |
|---|
| Symbol | glmS |
|---|
| ID | 1187287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 6376404 |
|---|
| End bp | 6378239 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637396908 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase, isomerizing |
|---|
| Protein accession | NP_795313 |
|---|
| Protein GI | 28872694 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TCGTCGGCGC CGTTGCTGAA CGTAATATCA CGGCTATTTT GCTCGAAGGC
CTCAAGCGCC TTGAATATCG CGGCTATGAC AGCGCAGGCG TGGCTGTCTT CACTAACGAA
GGCGTTCTTG AACGCCGTCG TCGCTCCGGC AAGGTCAGCG AGCTGGAACA GGCGCTGGCC
GGCGAGCCAC TGATCGGCCG TCTGGGCATT GCTCACACCC GCTGGGCCAC GCATGGCGCA
CCGTGCGAGC GTAATGCACA CCCACACTTT TCGGCCGACG AGCTGGCAGT TGTCCACAAC
GGCATCATCG AAAACCACGA GGCCCTGCGC GAACAGCTCA AAAGCCTGGG CTACGTTTTC
GTGTCCGATA CTGACACCGA AGTCATCGTT CACCTGCTGC ACCACAAACT CAAGGACACG
CCTGATCTGG CGGTTGCCCT GAAGTCTGCC GTGAAAGAAC TGCACGGTGC CTACGGCCTT
GCGGTGATCA ACGCCGCACA GCCTGATCGC CTGCTGGCCG CCCGCAGTGG CAGCCCGCTG
GTGATCGGCG TTGGCATGGG CGAAAACTTC CTGGCCTCCG ATCAACTGGC GCTGCGTCAG
GTGACCGACC GTTTCATGTA CCTGGAAGAG GGCGACATCG CCGAGATCCG TCGCGACAGC
GTGCAGATCT GGACCGTTGA CGGCCTGCCG GTCGTGCGTG AAGTGGTGCA GTACCACGAA
GGTGCAGAAG CCGCCGACAA AGGCGAATAC CGCCACTTCA TGCTCAAGGA AATCCACGAA
CAACCTAAAG TTGTGCAGCG CACGCTTGAA GGTCGTCTGG GCCAGCATCA GGTATTGGTC
CACGCATTTG GTCCACAGGC AGCCGAGCTG TTCGCCAAGG TCCGCAACGT TCAGATCGTG
GCGTGTGGCA CCAGCTATCA CGCCGGCATG GTCGCGCGTT ACTGGCTCGA AGGCCTTGCT
GGCATACCTT GCCAGGTAGA AGTGGCAAGC GAGTTCCGCT ACCGCAAGGT TGTGGTTCAG
CCAGACACCC TGTTCGTCTC CATCTCGCAA TCAGGCGAAA CCGCCGACAC GCTGGCCGCG
CTGCGCAATG CCAAAGAGCT GGGCTTTCTG GCCAGCCTGG CAATCTGCAA CGTGGGCATC
AGCTCGCTGG TGCGGGAATC CGACCTGACC CTGCTCACCC AGGCCGGTCC GGAAATCGGC
GTGGCATCCA CCAAAGCCTT CACCACGCAA CTGGTCGCCT TGCTGCTGCT GACCCTGTCG
CTGGGTCAGG TCAAAGGCTC GTTGGAGGAG GGCGTCGAAG CGCAACTGGT CGAAGAACTG
CGCCGCCTGC CGACCCGTTT GGGCGAAGCC CTGGCAATGG ACGGCACCAT CGAGAAAGTC
GCCGAGCTGT TCGCCGAGAA GCACCACACC CTGTTCCTCG GGCGCGGCGC GCAATTCCCG
GTGGCCATGG AAGGCGCGCT CAAGCTCAAA GAGATTTCCT ACATCCACGC CGAAGCCTAC
CCGGCTGGCG AACTCAAACA CGGCCCGCTG GCATTGGTCG ACGCCGACAT GCCGGTTGTC
ACCGTCGCGC CCAACAACGA GCTGCTGGAA AAACTCAAAT CCAACCTGCA GGAAGTCCGC
GCGCGCGGTG GAGAGTTGAT CGTATTCGCT GACGAGCAAG CCGGCATGAA AAACGGCGAA
GGCACCCACG TCATCGCCAT GCCGCACATC ATCGATGCGC TGGCGCCGAT TCTGTACACC
ATTCCGTTGC AGCTGCTTTC GTATTATGTG GCAGTGTTGA AAGGGACGGA CGTTGACCAG
CCGCGGAATC TGGCGAAGTC GGTGACGGTG GAGTGA
|
|---|
| Protein sequence | MCGIVGAVAE RNITAILLEG LKRLEYRGYD SAGVAVFTNE GVLERRRRSG KVSELEQALA
GEPLIGRLGI AHTRWATHGA PCERNAHPHF SADELAVVHN GIIENHEALR EQLKSLGYVF
VSDTDTEVIV HLLHHKLKDT PDLAVALKSA VKELHGAYGL AVINAAQPDR LLAARSGSPL
VIGVGMGENF LASDQLALRQ VTDRFMYLEE GDIAEIRRDS VQIWTVDGLP VVREVVQYHE
GAEAADKGEY RHFMLKEIHE QPKVVQRTLE GRLGQHQVLV HAFGPQAAEL FAKVRNVQIV
ACGTSYHAGM VARYWLEGLA GIPCQVEVAS EFRYRKVVVQ PDTLFVSISQ SGETADTLAA
LRNAKELGFL ASLAICNVGI SSLVRESDLT LLTQAGPEIG VASTKAFTTQ LVALLLLTLS
LGQVKGSLEE GVEAQLVEEL RRLPTRLGEA LAMDGTIEKV AELFAEKHHT LFLGRGAQFP
VAMEGALKLK EISYIHAEAY PAGELKHGPL ALVDADMPVV TVAPNNELLE KLKSNLQEVR
ARGGELIVFA DEQAGMKNGE GTHVIAMPHI IDALAPILYT IPLQLLSYYV AVLKGTDVDQ
PRNLAKSVTV E
|
|---|
| |