Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5584 |
Symbol | |
ID | 1187276 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6362330 |
End bp | 6363979 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637396899 |
Product | hypothetical protein |
Protein accession | NP_795304 |
Protein GI | 28872685 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAA TCAAAGCAGC TCGTCCCGAG TTTGCGATTG TGCTCGCCAG CTTATTTTTG TTACTGGCTT TCAATGCGAC GTTGTGGCAA CACCTGTTCA ACATCACAGA CAATCATGAC GGAAGTGCCG AGCTGCGTGT CGCATTCGGC CTCATAGTTT TTTGTATTTT CAACATTGTA CTGACATTGC TAGCTTTTAA AGTTGTGCTA AAACCAATTT TGACTGTCCT GTTCGTTCTG AGCGCAGCGG TCTCATACTT TATGGACCAG TATGGCGTTT TGATTGACGT AGGCATGTTC AGAAACGTGG CCGAAACCAA TATCACCGAA GCCCAGGGAT TGCTTTCTCT CAAACTGCTT GTCTACCTCG TGCTACTGGG CATCGTGCCC TCCATCGTAC TGTGGAAAAC CCCGATTAAC TATAGACGCT GGCCCAGAGA GTTACTCAGT AAAGCGATTG TCCTAGCTGG CTGCGGCTTT GCTGTAGGCT CGATTGCTCT GCTCAATTAC CAAGGCTTGT CATCGCTTCT TCGCAACCAC CACGAATTGC GACTTATGGT GGTTCCCAGC AACTACATTG GTGCCTCTAT CAGCTACCTG CGCGAGAAGG TGGTCTCCGC TCAGAAGCCT TTTTCAACCA TTGCCGAAGA CGCAAAGCTG AACAGCTCCT GGGCGCAACA TTCGCGAAAA TCGCTGACAG TACTGGTCAT CGGCGAAAGC GCACGTGCCG ATAACTTCGG AATCCTCGGC TACAGCCGAG ATACCACCCC AGAATTGCGC AGCCAGTCTG GTGTAATCGC GTTCAGCGAC GTGCAATCCT GCGGCACAGA GACGGCGGTA TCGGTACCGT GCATGTTCTC GAATATGGGT CGGAAAAACT ACAACCCTAC AACGGCCAAG AATCAGGAAG GGTTGCTGGA TGTACTGAAA CGCGCCGGAG TGGATGTGAT TTGGCGGGAC AACCAGTCCG GCTGCAAAGG CACCTGCGAC CGAGTGACCT TTGAAGATGT GAGCAATCTC GATGATCCTG CGTTATGCCT TGATAACGAA TGCCGCGACG AAATTCTGCT GCAGGGTCTG CAGGCGCGCA TCGATAACCT CGAAAAGGAC ACAGTGCTGG TGCTTCATCA AATGGGTAGC CACGGCCCGG AGTACTTCAA ACGTTACCCA AAAAAATTCG AGAAATTCAC GCCTGTTTGC GAAAGCAACG CGCTGAACAA TTGCTCGCGA GAAAGCATCG TCAACAGTTA CGACAATACG TTGACCTATA CCGACCATGT CTTGTCCAGC CTGATCAATA TCCTGCGCAG CAATCAGGAA AAAGTCGATA CGGCCATGTT GTATCTTTCA GACCATGGCG AATCACTGGG GGAATACAAC CTGTTCCTGC ATGGCACTCC TTACATGCTA GCGCCTATCC AGCAAAAGCA TGTCCCTATG ATCACCTGGT TCTCTGAAAA CTATAAAAAA TCGTTCGCTA TCAACTCAGA CTGCCTGAAA AAGAAGCGCG ACTCAGCACT GAGCCAGGAC AACCTGTTTC ACTCAATGCT GGGGTTAATG CGAGTAGATA CCAAGGCTTA CGACCCCGCT CTGGACATGT TTTCAGGCTG TCGAAGCCCC CGCGAACAGG ACGCATTGGC GGAGCAATAA
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Protein sequence | MWKIKAARPE FAIVLASLFL LLAFNATLWQ HLFNITDNHD GSAELRVAFG LIVFCIFNIV LTLLAFKVVL KPILTVLFVL SAAVSYFMDQ YGVLIDVGMF RNVAETNITE AQGLLSLKLL VYLVLLGIVP SIVLWKTPIN YRRWPRELLS KAIVLAGCGF AVGSIALLNY QGLSSLLRNH HELRLMVVPS NYIGASISYL REKVVSAQKP FSTIAEDAKL NSSWAQHSRK SLTVLVIGES ARADNFGILG YSRDTTPELR SQSGVIAFSD VQSCGTETAV SVPCMFSNMG RKNYNPTTAK NQEGLLDVLK RAGVDVIWRD NQSGCKGTCD RVTFEDVSNL DDPALCLDNE CRDEILLQGL QARIDNLEKD TVLVLHQMGS HGPEYFKRYP KKFEKFTPVC ESNALNNCSR ESIVNSYDNT LTYTDHVLSS LINILRSNQE KVDTAMLYLS DHGESLGEYN LFLHGTPYML APIQQKHVPM ITWFSENYKK SFAINSDCLK KKRDSALSQD NLFHSMLGLM RVDTKAYDPA LDMFSGCRSP REQDALAEQ
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