Gene PSPTO_5581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5581 
Symbol 
ID1187273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6359624 
End bp6359956 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content56% 
IMG OID637396896 
Producthypothetical protein 
Protein accessionNP_795301 
Protein GI28872682 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAA CACGCCGTTC CTATTCCAAT CCCTTCAAAG CCCAGGTCAT TCAGGAGTGT 
TCCCAACCCG GCGCTTCGAT TGCCAGCGTC GCACTCAGCC ATAATCTCAA CGCAAACCTC
GTCCACAAAT GGATTCGGCT GCATGCGCAG AAAAGCCCAA CGCTCCCACC TGCATTTATT
CCGTTAGCCA TGCCGCCGGC CGGTGCAAAC CCCCATCCAG CATCACCGAA TATCTGCGTT
GAAATACAGC ACACGCGCGG CACCGTAAAG GTGAGCTGGC CCACTGAAAA TGCTGCTGCT
TGCGCGACCT TTCTTCGAGA CCTTCTGCGA TGA
 
Protein sequence
MQPTRRSYSN PFKAQVIQEC SQPGASIASV ALSHNLNANL VHKWIRLHAQ KSPTLPPAFI 
PLAMPPAGAN PHPASPNICV EIQHTRGTVK VSWPTENAAA CATFLRDLLR