Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5581 |
Symbol | |
ID | 1187273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 6359624 |
End bp | 6359956 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637396896 |
Product | hypothetical protein |
Protein accession | NP_795301 |
Protein GI | 28872682 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCCAA CACGCCGTTC CTATTCCAAT CCCTTCAAAG CCCAGGTCAT TCAGGAGTGT TCCCAACCCG GCGCTTCGAT TGCCAGCGTC GCACTCAGCC ATAATCTCAA CGCAAACCTC GTCCACAAAT GGATTCGGCT GCATGCGCAG AAAAGCCCAA CGCTCCCACC TGCATTTATT CCGTTAGCCA TGCCGCCGGC CGGTGCAAAC CCCCATCCAG CATCACCGAA TATCTGCGTT GAAATACAGC ACACGCGCGG CACCGTAAAG GTGAGCTGGC CCACTGAAAA TGCTGCTGCT TGCGCGACCT TTCTTCGAGA CCTTCTGCGA TGA
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Protein sequence | MQPTRRSYSN PFKAQVIQEC SQPGASIASV ALSHNLNANL VHKWIRLHAQ KSPTLPPAFI PLAMPPAGAN PHPASPNICV EIQHTRGTVK VSWPTENAAA CATFLRDLLR
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