Gene PSPTO_5567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5567 
Symbol 
ID1187259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6345505 
End bp6346263 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content49% 
IMG OID637396886 
Producthypothetical protein 
Protein accessionNP_795291 
Protein GI28872672 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC TACCTAAAAT TACGCTCGCG TTTTGGATAA TGAAAATTTG CGCGACCACG 
CTTGGTGAGA CTGCAGGCGA CTTGTTGTCC ATGACCTTGG ACGTCGGTTA CGCTATCAGC
TCGCTAATTC TTGTAAGTGT TTTTGTCGTA ACTCTTCTCA TGCAGCTTGC CAGCAAACGC
TACAACCCGG CCCTTTACTG GGTTGTAATC CTGTCCACCA GCACTGCTGG CACCACTATC
TCCGACTTTA TGGATCGTAC ATTGGGCCTT GGTTATACAA CTGGCTCGGC GATTCTGATC
GCAGTGTTAT TGGCAGTTTT TTCAGTGTGG TACTGGAGCG AAAAATCACT ATCGGTTAAC
CGTATAACCT CGCTCAAAGC GGAGCTTTTC TACTGGATTG CGATTCTGAT TTCTAACACG
CTCGGCACCG CTCTAGGCGA TTTCCTCGCT GATGACTCAG GTCTAGGTTT CATGGGGGGC
GCGCTTCTTG TAGGCAGCGG CATCGCCATA GTCGCGGCGC TACATTACAC AACAAAACTA
TCTTCTGTGG CTTTGTTCTG GATAGCCTTT GTGCTGACAC GTCCCTTTGG TGCAACACTC
GGAGACGTGC TTACCAAGCC CTATTCAAAA GGAGGCCTAG ACTTCGGCAC CGTGGGTTCC
TCAGCGGTAC TAGTGGGGAT TCTCCTGACT ATGATTGTAG CTGCGACTAT GTATAACCGC
AGAAGAACAC ATAGGTATGA TCAAATTTCT GATCGCTGA
 
Protein sequence
MNKLPKITLA FWIMKICATT LGETAGDLLS MTLDVGYAIS SLILVSVFVV TLLMQLASKR 
YNPALYWVVI LSTSTAGTTI SDFMDRTLGL GYTTGSAILI AVLLAVFSVW YWSEKSLSVN
RITSLKAELF YWIAILISNT LGTALGDFLA DDSGLGFMGG ALLVGSGIAI VAALHYTTKL
SSVALFWIAF VLTRPFGATL GDVLTKPYSK GGLDFGTVGS SAVLVGILLT MIVAATMYNR
RRTHRYDQIS DR