Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5567 |
Symbol | |
ID | 1187259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 6345505 |
End bp | 6346263 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637396886 |
Product | hypothetical protein |
Protein accession | NP_795291 |
Protein GI | 28872672 |
COG category | [S] Function unknown |
COG ID | [COG4705] Uncharacterized membrane-anchored protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC TACCTAAAAT TACGCTCGCG TTTTGGATAA TGAAAATTTG CGCGACCACG CTTGGTGAGA CTGCAGGCGA CTTGTTGTCC ATGACCTTGG ACGTCGGTTA CGCTATCAGC TCGCTAATTC TTGTAAGTGT TTTTGTCGTA ACTCTTCTCA TGCAGCTTGC CAGCAAACGC TACAACCCGG CCCTTTACTG GGTTGTAATC CTGTCCACCA GCACTGCTGG CACCACTATC TCCGACTTTA TGGATCGTAC ATTGGGCCTT GGTTATACAA CTGGCTCGGC GATTCTGATC GCAGTGTTAT TGGCAGTTTT TTCAGTGTGG TACTGGAGCG AAAAATCACT ATCGGTTAAC CGTATAACCT CGCTCAAAGC GGAGCTTTTC TACTGGATTG CGATTCTGAT TTCTAACACG CTCGGCACCG CTCTAGGCGA TTTCCTCGCT GATGACTCAG GTCTAGGTTT CATGGGGGGC GCGCTTCTTG TAGGCAGCGG CATCGCCATA GTCGCGGCGC TACATTACAC AACAAAACTA TCTTCTGTGG CTTTGTTCTG GATAGCCTTT GTGCTGACAC GTCCCTTTGG TGCAACACTC GGAGACGTGC TTACCAAGCC CTATTCAAAA GGAGGCCTAG ACTTCGGCAC CGTGGGTTCC TCAGCGGTAC TAGTGGGGAT TCTCCTGACT ATGATTGTAG CTGCGACTAT GTATAACCGC AGAAGAACAC ATAGGTATGA TCAAATTTCT GATCGCTGA
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Protein sequence | MNKLPKITLA FWIMKICATT LGETAGDLLS MTLDVGYAIS SLILVSVFVV TLLMQLASKR YNPALYWVVI LSTSTAGTTI SDFMDRTLGL GYTTGSAILI AVLLAVFSVW YWSEKSLSVN RITSLKAELF YWIAILISNT LGTALGDFLA DDSGLGFMGG ALLVGSGIAI VAALHYTTKL SSVALFWIAF VLTRPFGATL GDVLTKPYSK GGLDFGTVGS SAVLVGILLT MIVAATMYNR RRTHRYDQIS DR
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