Gene PSPTO_5540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5540 
Symbol 
ID1187232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp6308865 
End bp6309485 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content62% 
IMG OID637396859 
Productacyltransferase, putative 
Protein accessionNP_795264 
Protein GI28872645 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.620465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAC CTCTGGTCGC CACGATCATC ACCGCAGGCG CGCGCAGCAT CACCGGTGCA 
CGCAGCTTAT GGCTGGGTTG CACGCCTGAG CTGCGGCAAC GGATCTACTT TGCCAATCAC 
AGCAGCCACG GCGACTTCGT GCTGCTCTGG GCCTCGCTGC CTCCTGCGCT GCGCAAGACC 
GCCAGGCCGG TTGCCGGCGC CGATTACTGG CAGACCAGCC CGTTGCGGCG CTACATCATC 
AACCGCGTGT TCAACGGTGT GCTGGTGGAT CGCAAGCGCA GCACGCCGGA AAGCAACCCG 
CTGCAACCGA TGCTCGAAGC ACTGGAAAAC GGCGACTCGC TGATTTTTTT CCCTGAGGGC 
ACGCGCAACC CGGAAGACGG CTTACTGCCC TTCAAAAGCG GGCTTTATCA CTTGGCGCAG 
AGTTATCCAC AGGTCGACCT AGTGCCCGTG TGGATTGCCA ACCTCAACCG GGTCATGCCC 
AAAGGCCGCA TGTTGCCGTT GCCCCTGCTA TGCACCACCA GTTTCGGCGC GCCTCTGCGT 
CTGGACAGCG AAGAAAGCAA AGAGCAATTC CTCACCCGCA GCCGTGACGC GCTGCTGGCC 
CTGGCACCGG AGCCGCTGTA A
 
Protein sequence
MFEPLVATII TAGARSITGA RSLWLGCTPE LRQRIYFANH SSHGDFVLLW ASLPPALRKT 
ARPVAGADYW QTSPLRRYII NRVFNGVLVD RKRSTPESNP LQPMLEALEN GDSLIFFPEG 
TRNPEDGLLP FKSGLYHLAQ SYPQVDLVPV WIANLNRVMP KGRMLPLPLL CTTSFGAPLR 
LDSEESKEQF LTRSRDALLA LAPEPL