| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5537 |
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| Symbol | |
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| ID | 1187229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6305268 |
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| End bp | 6307025 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396856 |
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| Product | hypothetical protein |
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| Protein accession | NP_795261 |
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| Protein GI | 28872642 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGATG TGAATGATCA GCGCTTCACC ACCCACGATG GCGTGGAGCT GTTCTACCGC
CACTGGCCTG TTGCACACCC GACGCCCGGT GCGCCACGGC AAGCGGTGTT GCTGTTTCAT
CGCGGCCACG AGCATTCCGG GCGAATTGCG CATCTGGTTG ATGAACTGGA CCTGCCAGGC
TTTGATTTTT TCGCCTGGGA TGCCCGCGGT CACGGCCAGT CGCCCGGGGC CCGTGGTGAC
AGCCCGAGCT TTGCGACCAG CGTTCGCGAC GTGCAGACCT TCGTCGATCA CCTGCGCGTC
ACGTTTGATA TTGCCGAAGA GAACATGGCG GTGATCGCGC AAAGCGTAGG CGCCGTCATT
GCAGCGACAT GGGCGCACGA CTACGCACCG AAGATCCGCG CACTGGTCCT CGCCTCCCCC
GCCTTCAAGG TCAAGCTGTA CGTACCTTTC GCCCGCACGG GGCTGGCGCT GCTGCGCAGG
TTCAAGGGCA ATTTCTTCGT CAACAGCTAC GTCAAGGCGC GCTTCCTGAG CCACGATCCG
CAACGTATCG CGTCCTACGA CAGCGACCCG CTGATCACCA AGGCCATTTC AGTGAATGTA
CTGCTGGGCC TGTATGAAGC CGCCGACCGT GTGGTTGCCG ATGCCCAGGC GATCCAGATC
CCGACCCAAT TGCTGATTTC CGGCTCGGAT TTCGTCGTGC ATCGCGCGCC GCAGGAGCGT
TTTTTCGAAC AACTGGGCAG CTTGCGCAAG GAGAAACACA TCCTGCCAGG GTTCTTCCAC
GACACGTTGG GCGAGCGCGA CCGTCACTTG GCGCTGAGCC GCGCGCGGCG CTTTGTTTTG
CAGAGTTTTG AAACGCCGAT GCACCGCCCG TCGTTGCTGG ACGCTGACCG GCTGGGCGCA
ACCTGTGCGG AGTCCGAAGA GCTGGCCGCG CCGTTGCCGC ACAATTCGTT GCGCGACCTG
TACTGGCGCA TGACCCACGC CAGCATGCGC CTTGGCAGCA AGTTATCCAC AGGGGTGAAA
CTGGGTTTCG ACACTGGTTT CGATTCTGGC AGCACGCTTG ATTACGTCTA TCGCAACCGA
CCCGCCGGCA AAGGCGCGCT GGGTCGCATG ATCGACAAGA ACTACCTGCA ATCGATCGGC
TGGCGTGGCA TTCGCCAACG CAAGCTGCAT GCCGAAGAAC TGCTGCGCCT GGCCATGGCG
CATTTGCGCA ATCAGGGCAA ACCGGTACGC ATCGTGGACA TCGCCGCCGG GCACGGGCGC
TACATTCTGG AGTCGTTGCG GGGCGTAGAG CCGCTGCCGG AATCCATTCT GCTGCGCGAC
TACAGCGACA TCAATGTGCG CGACGGCAGC CTGCTGATAG AGCAGAAAGA TCTGGAAGAC
ATCGCGCGCT TCGTCAAGGG CGATGCCTTT GACCGCAACG ACCTGGCGAC GCTGGACCCC
AAACCGACGC TGGCGGTGGT GTCGGGGCTG TACGAGTTGT TTTCCAGCAA CCAGATGGTC
GGCGATTCGC TGGCCGGGCT GGCGGCAGCC GTCGAACCGG GCGGTTATCT GGTGTACACC
GGGCAGCCGT GGCACCCGCA ACTGGAGCTG ATCGCCCGCG CCCTGACCAG CCATCGCGAA
GGCCAGGCCT GGGTAATGCG CCGTCGCAGT CAGTCAGAGA TGGACCAACT GGTGGAAGCC
GCAGGCTTTC GCAAGATCAC CCAGCGTGTG GATGAATGGG GGATTTTCAC TGTGTCCCTC
GCGCAGCGCA TCCAGTGA
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| Protein sequence | MRDVNDQRFT THDGVELFYR HWPVAHPTPG APRQAVLLFH RGHEHSGRIA HLVDELDLPG
FDFFAWDARG HGQSPGARGD SPSFATSVRD VQTFVDHLRV TFDIAEENMA VIAQSVGAVI
AATWAHDYAP KIRALVLASP AFKVKLYVPF ARTGLALLRR FKGNFFVNSY VKARFLSHDP
QRIASYDSDP LITKAISVNV LLGLYEAADR VVADAQAIQI PTQLLISGSD FVVHRAPQER
FFEQLGSLRK EKHILPGFFH DTLGERDRHL ALSRARRFVL QSFETPMHRP SLLDADRLGA
TCAESEELAA PLPHNSLRDL YWRMTHASMR LGSKLSTGVK LGFDTGFDSG STLDYVYRNR
PAGKGALGRM IDKNYLQSIG WRGIRQRKLH AEELLRLAMA HLRNQGKPVR IVDIAAGHGR
YILESLRGVE PLPESILLRD YSDINVRDGS LLIEQKDLED IARFVKGDAF DRNDLATLDP
KPTLAVVSGL YELFSSNQMV GDSLAGLAAA VEPGGYLVYT GQPWHPQLEL IARALTSHRE
GQAWVMRRRS QSEMDQLVEA AGFRKITQRV DEWGIFTVSL AQRIQ
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