| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5528 |
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| Symbol | |
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| ID | 1187220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6293693 |
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| End bp | 6294916 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396847 |
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| Product | N-acetylmuramoyl-L-alanine amidase, family 3 |
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| Protein accession | NP_795252 |
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| Protein GI | 28872633 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCGAC GTCAAGTGTT GCTCAATATG TTGCTGGCCA GCGCCGCCCT GACGTTGCCG
TTTGGCGTGT GCGCTACGCA GATCAGTAAT GCGCGCCTTT GGCGGACCAA CGACAAGCTA
CGGCTGGTGC TCGACCTGAG CGGCCCGGTG CAATACAAAA CCTTCTCGCT GACTTCGCCC
GACCGTCTGA TCATTGATGT CAGCGGTTCG CGGCTGACTG GCGATTTCAG CCAGCTGGCG
CTGGATCGCA CGGTTATCAA ATCGATTCGT TCCGGTCACT ACGGCACGGG CGATGACACG
CGCATCGTGC TAGACCTGAC TGCGCCGGTG CAGCTCAACA GCTTCTTGCT CGGCCCGGAA
GGCGGGCAGG GCCACAGGCT GGTGCTGGAC ATGAGTTCCA CGGCTCGTGC GCCGGTACAG
ATGGCCGAGC TGCCGCCGCC CGTGCCGGTT CCCATCCAGA GCAAAGCGCG CACCGGCCGC
GACATCATGG TGGTGGTCGA CGCCGGTCAT GGCGGCAAGG ACCCAGGTGC TGTCGGGTCG
CGTGGCGAGC GCGAGAAAGA TGTGGTGCTG TCGATCGCCC AGTTGCTGGC CAAACGCTTG
AAGCGCGAGA AGGGTTTTGA TGTGCGCTTG GTGCGCAATG ACGACTTCTT TGTGCCGCTG
CGCAAGCGCG TCGAGTTCGC GCATAAATCC AATGCCGACA TGTTCATCTC CGTGCACGCC
GACGCCGCGC CTCGTCTGAC GGCGTCCGGT GCTTCGGTGT TCGCGTTGTC CGAAGGCGGC
GCCACGTCGG CAACCGCGCG CTTCATGGCG CAGCGGGAAA ACGGTGCGGA CCTGCTGGGC
GCGACGTCGC TGCTCAACCT CAAGGACAAG GACCCGATGC TTGCCGGGGT GATTCTCGAC
ATGTCGATGA ACGCCACCAT CGCCGCCAGT CTGCAACTGG GTCACACGAT ACTGGGCAGC
CTGGAAGGCA TCACCACGTT GCACCAGAAG CGTGTGGAAC AAGCCGGATT CGCGGTGCTC
AAATCGCCGG ATGTGCCGTC GATTCTGGTT GAAACCGGGT TCATCTCCAA CAGCCGTGAC
AGTCAGCGTC TGGTCACAGC GCGCCATCAA CAGGCCGTTG CGGACGGGCT GTTCGATGGC
CTGCAACGTT ACTTCCAGCG CAACCCGCCC ATGGATTCGC ACCTGGCCTG GATGCAGGCG
CAAAAGCAGG AGCAGCAGGC GTGA
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| Protein sequence | MHRRQVLLNM LLASAALTLP FGVCATQISN ARLWRTNDKL RLVLDLSGPV QYKTFSLTSP
DRLIIDVSGS RLTGDFSQLA LDRTVIKSIR SGHYGTGDDT RIVLDLTAPV QLNSFLLGPE
GGQGHRLVLD MSSTARAPVQ MAELPPPVPV PIQSKARTGR DIMVVVDAGH GGKDPGAVGS
RGEREKDVVL SIAQLLAKRL KREKGFDVRL VRNDDFFVPL RKRVEFAHKS NADMFISVHA
DAAPRLTASG ASVFALSEGG ATSATARFMA QRENGADLLG ATSLLNLKDK DPMLAGVILD
MSMNATIAAS LQLGHTILGS LEGITTLHQK RVEQAGFAVL KSPDVPSILV ETGFISNSRD
SQRLVTARHQ QAVADGLFDG LQRYFQRNPP MDSHLAWMQA QKQEQQA
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