| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5521 |
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| Symbol | pdxY |
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| ID | 1187213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 6288458 |
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| End bp | 6289324 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396840 |
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| Product | pyridoxal kinase |
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| Protein accession | NP_795245 |
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| Protein GI | 28872626 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
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| TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTA CGCCCCACTT GCTCGCTATT CAGTCCCATG TGGTGTTCGG CCACGCCGGC
AACAGCGCAG CGGTGTTCCC GATGCAGCGT ATTGGAGTCA ATGTCTGGCC GCTCAACACG
GTTCAGTTCT CCAACCACAC GCAATACAAG CAGTGGACGG GCGAAGTCCT GGCCCCGCAG
CAAATCCCCG CGCTGATCGA CGGTATTGCC GCCATTGGCG AGCTGGGTAA CTGTGATGCG
GTGTTGTCCG GCTATCTGGG CAGTGCAGCG CAGGGGCGGG CGATTCTGAG TGGTGTGGCG
CGCATCAAGG CCGCCAATCC CAAGGCGCTG TACCTGTGCG ACCCGGTGAT GGGCCATCCT
GAAAAAGGCT GCATCGTACC GCCGCAAGTC AGCGATTTTC TGCTCGAGGA GGCCGCAGCC
GTGGCTGACT TCATGTGCCC CAATCAGCTG GAACTGGACA GCTTCTCGGG CCGCAAGCCT
GAATCACTGC CCGATTGTCT GGCGATGGCA CGGGCGCTGT TGGCGCGAGG CCCCAAGGCC
ATCGTGGTCA AGCACCTCGA TTATCCCGGC AAGGCCGCCG ATGGCTTTGA AATGCTGCTG
GTGACCGCCG AGGCCAGTTG GCACCTGCGC CGTCCGCTGC TGGCGTTTCC GCGCCAGCCG
GTTGGTGTAG GTGATCTGAC GTCCGGGTTG TTTCTGTCGC GAATTCTGCT GGGCGACGAT
CTGGTCGCGG CGTTCGAGTT CACCGCAGCA GCAGTCCATG AAGTGCTTCT GGAAACCCAG
GCGTGTGGCA GTTACGAGCT GGAACTGGTC CGTGCCCAGG ATCGCATCGC GCATCCCCGG
GTGAAGTTCG AAGCCGTGCG GTTATAA
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| Protein sequence | MKRTPHLLAI QSHVVFGHAG NSAAVFPMQR IGVNVWPLNT VQFSNHTQYK QWTGEVLAPQ
QIPALIDGIA AIGELGNCDA VLSGYLGSAA QGRAILSGVA RIKAANPKAL YLCDPVMGHP
EKGCIVPPQV SDFLLEEAAA VADFMCPNQL ELDSFSGRKP ESLPDCLAMA RALLARGPKA
IVVKHLDYPG KAADGFEMLL VTAEASWHLR RPLLAFPRQP VGVGDLTSGL FLSRILLGDD
LVAAFEFTAA AVHEVLLETQ ACGSYELELV RAQDRIAHPR VKFEAVRL
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