| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5518 |
|---|
| Symbol | |
|---|
| ID | 1187210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 6285423 |
|---|
| End bp | 6285830 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637396837 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_795242 |
|---|
| Protein GI | 28872623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGAAG TCATCGAACA ATTGCGTGAA GCGAATGAAC CAGTCCCGGT TCCGCTTGAG
CTGCCCGACG AGGACCAACT GGTCGAGATC GAGGAACAGC TGTTTATCAA CATCCCGTTC
GTCTTCAAGG AGTTTCTCCT GACGGTCAGC GACGTGGTGT ATGGCAGCCT TGAGCCGGTC
ACTGTGACCG ACCCGCAGTC GCACACCTAC CTGCCGGAAG TCTGTGCCAC CGCCTGGGAT
CTGGGCGTGC CGCGCGAGCT GATCCCGATC TGCCAGGACG GCGAAGACTA TTACTGCGTC
GAGGAAGACG GCACTGTGTT GCTGTGGTCC GCCGAAGAAG AACTGGTTAC CGAAGAAAGC
TGGGAGTCGG TCTGGCACTG GGCTCGGGAT GTCTGGCTGG AAAGCTGA
|
|---|
| Protein sequence | MEEVIEQLRE ANEPVPVPLE LPDEDQLVEI EEQLFINIPF VFKEFLLTVS DVVYGSLEPV
TVTDPQSHTY LPEVCATAWD LGVPRELIPI CQDGEDYYCV EEDGTVLLWS AEEELVTEES
WESVWHWARD VWLES
|
|---|
| |