Gene PSPTO_5501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5501 
SymbolansA 
ID1187193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6266793 
End bp6267797 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content64% 
IMG OID637396820 
ProductL-asparaginase I 
Protein accessionNP_795225 
Protein GI28872606 
COG category[E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D 
TIGRFAM ID[TIGR00519] L-asparaginases, type I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATG ATGCACATCA ACCCGCTCAG CGAGTCATGG TTCTTTACAC CGGCGGCACC 
ATCGGCATGC AGGCCAGCGC CAACGGCCTG GCTCCTGCCT CGGGGTTTGA AGCGCGGATG
GCCGGGCAAC TGGCCGACCA CCCCGAACTG CGGGTGCCGC AGTGGCGCTT TCGCGAGATG
TCGCCGCTGA TCGACAGCGC CAACATGACC CCCGCCTACT GGCTGCGCCT GCGTGAGGCG
GTGATCGAGG CGGTGGATGT CGAGGGCTGC GACGCGGTGC TGGTGCTGCA CGGCACCGAC
ACCCTGGCGT ACAGCGCCGC CGCCATGTGC TTCCAGCTGT TGGGTTTCAG CGCGCCAGTG
GTGTTCACCG GTTCCATGCT GCCTGCCGGT GTGCAGGACA GCGATGCCTG GGAAAACGTC
AACGGTGCCC TGCTTGCGCT GGGTTCCGGC CTGGTGTCGG GCGTTCAGCT GTATTTCCAC
GGGCAACTGA TGACGCCTGT GCGCTGCGCA AAAATTCGCA GCTTCGGTCG TCAACCGTTC
GCGCCACTGC AACGCTCGCG CGGCGGTCAT GCGGTGGTTT CGCTGCCTGA TGCACTGGAT
TACCGGCGAA CCAAGGCGCA AGCCAGGGTC GCTGTATTGC CATTGTTTCC AGGCGTCGGC
GCAGCCCAGC TGGACGGGTT GGTCAACAGC CGTATCCAGG GTCTGGTACT CGAATGCTTC
GGCAGCGGCA CCGGGCCCAG TGATGATCCG CAGTTTCTGG CCAGCCTGGA GAACGCTCGC
GCGCAGGGTG TCTGCGTGGT CGCGATCACT CAGTGCCATG AAGGTGGTGT CGAACTGGAT
GTGTACGAGG CGGGAAGCCG TCTGCGCGGT GCAGGTGTGC TTTCCGGTGG TGGCATGACC
CGTGAAGCGG CGCTTGGCAA GTTGCATGCG CTGCTCGGTG CCGGCCTGAC CACCGAAGAA
GTTCGGCGTC TTGTCGAGCT GGACCTGTGT GGCGAGTTGC GTTAA
 
Protein sequence
MSHDAHQPAQ RVMVLYTGGT IGMQASANGL APASGFEARM AGQLADHPEL RVPQWRFREM 
SPLIDSANMT PAYWLRLREA VIEAVDVEGC DAVLVLHGTD TLAYSAAAMC FQLLGFSAPV
VFTGSMLPAG VQDSDAWENV NGALLALGSG LVSGVQLYFH GQLMTPVRCA KIRSFGRQPF
APLQRSRGGH AVVSLPDALD YRRTKAQARV AVLPLFPGVG AAQLDGLVNS RIQGLVLECF
GSGTGPSDDP QFLASLENAR AQGVCVVAIT QCHEGGVELD VYEAGSRLRG AGVLSGGGMT
REAALGKLHA LLGAGLTTEE VRRLVELDLC GELR