Gene PSPTO_5487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5487 
Symbol 
ID1187179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp6253460 
End bp6254458 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content58% 
IMG OID637396806 
Productphosphate ABC transporter, periplasmic phosphate-binding protein, putative 
Protein accessionNP_795211 
Protein GI28872592 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0226] ABC-type phosphate transport system, periplasmic component 
TIGRFAM ID[TIGR02136] phosphate binding protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCA AGCGTTTGAT GACTGCACTG ACGTTCGTTG CCGCTGGAGT GGCAGCAACC 
CACACGTTCG CGGCCGTCGA CCCAGCCATC AAGGCCTATA CCAAGACCTC GGGTGTGTCG 
GGCAATCTCT CCAGTGTCGG TTCCGATACC CTGGCAAATC TCATGACCTT GTGGGCCGAG 
GCGTACAAGA AAGAATACCC GAGCGTGAAC ATCCAGATTC AGGCGGCGGG TTCTTCCACC 
GCCCCGCCTG CATTGACCGA AGGCACCGCC AACCTGGGGC CGATGAGCCG CAGGATGAAA 
GACGGCGAAC TGTCGGCCTT CGAGCAAAAG CACGGTTACA AACCTACTGC GATTCCGGTC 
GCGGTCGATG CGCTGGCGGT GTTCGTGCAC AAGGACAACC CGATCAAGGG CCTGACCCTG 
CAGCAAGTGG ACGCGATTTT CTCAGTAACC CGGCTGTGCG GTGCCAAGGC TGATGCAAAA 
ACCTGGGGTG ATGTGGGCGT GACGGGCGAT CTGGCGGGCA AGCCGATCCA GCTGTTTGGT 
CGCAACTCGG TGTCAGGCAC TTACGGTTAC TTCAAGGAAG AAGCCCTGTG CAAAGGCGAC 
TTCAAGGCCA ACGTCAATGA GCAGCCGGGT TCGGCATCGG TGGTCAGCGC CATCAGCAAC 
TCGCTGAACG GTATTGGTTA CTCGGGCATT GGTTATAAAA CGTCCAATGT CAGGACCGTG 
CCGCTGGCCA AGAAAGCGGG TGGCGAGTTT GTCGAAGACA ACGAAGCCAA CACGTTGAAC 
GGCACCTATC CGCTGTCGCG CTTTCTCTAC GTTTACGTGA ATAAGGCACC CAACCAGCCT 
CTGGCACCGC TGGAAGCAGA GTTCGTCAAA CTGGTGCTGT CCAGACAAGG CCAGGAAGTG 
GTGATGAAAG ACGGTTATAT TCCGCTGCCC GCGCGCGTAG TGGAAAAGAC CCTGACTGAT 
CTCGGCCTGC AGGGCGCAAG CGGGCTGGCA GTCAAGTAG
 
Protein sequence
MTLKRLMTAL TFVAAGVAAT HTFAAVDPAI KAYTKTSGVS GNLSSVGSDT LANLMTLWAE 
AYKKEYPSVN IQIQAAGSST APPALTEGTA NLGPMSRRMK DGELSAFEQK HGYKPTAIPV 
AVDALAVFVH KDNPIKGLTL QQVDAIFSVT RLCGAKADAK TWGDVGVTGD LAGKPIQLFG 
RNSVSGTYGY FKEEALCKGD FKANVNEQPG SASVVSAISN SLNGIGYSGI GYKTSNVRTV 
PLAKKAGGEF VEDNEANTLN GTYPLSRFLY VYVNKAPNQP LAPLEAEFVK LVLSRQGQEV 
VMKDGYIPLP ARVVEKTLTD LGLQGASGLA VK