| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5479 |
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| Symbol | |
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| ID | 1187171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6239166 |
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| End bp | 6240506 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396798 |
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| Product | transporter, putative |
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| Protein accession | NP_795203 |
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| Protein GI | 28872584 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCTT CTCCTAGTTT TAACCTGTCT TCACTCTTTG CCGACTTCGG CATGATTCTC
TTTGCTCTGT TCCTGGTCCT GCTCAACGGC TTTTTCGTTG CGGCAGAGTT TGCCATGGTC
AAACTGCGCT CGACCAAGGT CGAGGCCATC GCCGACAAGA ACGGCTGGCG CGGGCACATT
CTGCGCAAGG TCCACGGCCA ACTGGACGCC TATCTCTCGG CCTGCCAGCT GGGTATCACC
CTCGCCTCTC TCGGCCTGGG CTGGGTGGGC GAACCGGCGT TTGCGCACCT GCTGGAGCCA
CTGCTCGCAG CAATGGGCGT CGACACCCCG GAACTGATCA AGGGCGTGTC GTTCTTTACC
GCCTTCTTCA TCATTTCCTA CCTGCACATC GTCATCGGCG AGCTGGCCCC CAAGTCATGG
GCAATCCGCA AGCCGGAGCT GCTGTCGCTA TGGACGGCGG CACCGTTGTA CTTTTTCTAC
TGGCTGATGT ACCCGGCCAT CTACCTGCTC AACGCCAGCG CCAACGCCAT TCTGCGCATC
GCAGGCCAGG GCGAGCCTGG CCCGCACCAT GAGCACAGCT ACAGCCGCGA TGAACTGAAA
CTGATTCTGC ACTCCAGCCG TGGTCAGGAC CCAAGCGATC AGGGCATGCG GGTGCTGGCA
TCTGCTGTGG AAATGGGCGA GCTGGAAGTG GTCGATTGGG CCAACTCCCG CGAAGACATG
GTCTCGCTGG ACTTCAACGC GCCGCTCAAG GAAATTCTGG CCTTGTTTCG TCGCCACAAA
TTCAGCCGTT ATCCGCTGTA CGACGCCGAA CGTGGCGAGT TCGTCGGGCT GTTGCACATC
AAGGACTTGC TGCTGGAGCT GGCCGCGCTG GATCATATTC CCGAATCCTT CAACCTGGCT
GAACTGACCC GCCCGCTGGA GCGCGTGTCG CGGCACATGC CGCTGTCGCA ATTGCTGGAG
CAGTTCCGCA AGGGCGGCGC GCATTTCGCC GTGGTCGAAG AAGCCGACGG CAAGATCGTC
GGCTACCTGA CCATGGAAGA CGTACTCGAA GTGCTGGTCG GCGATATTCA GGACGAACAC
CGCAAGGTGG AGCGCGGCAT TCTCGCTTAC CAGCCGGGCA AGCTGTTGGT GCGTGGCGAT
ACGCCGCTGT TCAAGATCGA GCGTCTGCTG GGCATCGACC TGGATCACAT CGAAGCGGAA
ACCCTGGCAG GTCTGATCTA CGAAACCCTC AAGCGCGTGC CGGAAGAAGA AGAGCAGATG
GAAGTCGAGG GCCTGCGCAT CATCATCAAA AAGATGAAAG GCCCGAAAAT CGTTTTGGCT
AAAGTGCTGA AGCTGGATTG A
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| Protein sequence | MDPSPSFNLS SLFADFGMIL FALFLVLLNG FFVAAEFAMV KLRSTKVEAI ADKNGWRGHI
LRKVHGQLDA YLSACQLGIT LASLGLGWVG EPAFAHLLEP LLAAMGVDTP ELIKGVSFFT
AFFIISYLHI VIGELAPKSW AIRKPELLSL WTAAPLYFFY WLMYPAIYLL NASANAILRI
AGQGEPGPHH EHSYSRDELK LILHSSRGQD PSDQGMRVLA SAVEMGELEV VDWANSREDM
VSLDFNAPLK EILALFRRHK FSRYPLYDAE RGEFVGLLHI KDLLLELAAL DHIPESFNLA
ELTRPLERVS RHMPLSQLLE QFRKGGAHFA VVEEADGKIV GYLTMEDVLE VLVGDIQDEH
RKVERGILAY QPGKLLVRGD TPLFKIERLL GIDLDHIEAE TLAGLIYETL KRVPEEEEQM
EVEGLRIIIK KMKGPKIVLA KVLKLD
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