Gene PSPTO_5466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5466 
Symbol 
ID1187158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp6228554 
End bp6228769 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content56% 
IMG OID637396785 
Producthypothetical protein 
Protein accessionNP_795190 
Protein GI28872571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACGTA CAATCAGTTC CGATCTGTTC AGCGAAAGCA CCGTCAACAC TGCAAAAGCT 
TCTTTGCCTC TGCGCGTATT CGCCAACCTG ATGCTCTGGC AGCGTCGCTT GTCCAGCCGC
CATCAACTGG CTCGCCTGGA TTCCCGTCTG CTGGCTGACG CCGGTATCAG CGAATCCCAG
CGTTACGAAG AGCTGAGCAA GCCGTTCTGG CGCTAA
 
Protein sequence
MERTISSDLF SESTVNTAKA SLPLRVFANL MLWQRRLSSR HQLARLDSRL LADAGISESQ 
RYEELSKPFW R